RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 IRX3P78415 501 aaPredicted RBP22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 TKFCQ3LXA3 575 aa22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 MCTP2Q6DN12 878 aa22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 CUL5Q93034 780 aa22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 P2RX7Q99572 595 aaKnown RBP22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 CREBZFQ9NS37 354 aa22.3■■□□□ 1.16
CHMP2B-204ENST00000472024 MYH15Q9Y2K3 1946 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 COL11A1P12107 1806 aaPredicted RBP22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 RASSF10A6NK89 507 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 ADAMTS3O15072 1205 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 APLP1P51693 650 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 INHBEP58166 350 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 NR5A1Q13285 461 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 TMEM132BQ14DG7 1078 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 MYSM1Q5VVJ2 828 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 MCTP1Q6DN14 999 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 CCDC174Q6PII3 467 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 TEX13BQ9BXU2 312 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 PSTPIP2Q9H939 334 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 PCDHA6Q9UN73 950 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 PCDHA8Q9Y5H6 950 aa22.29■■□□□ 1.16
CHMP2B-204ENST00000472024 BAG4O95429 457 aaKnown RBP22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 TRAPPC10P48553 1259 aa22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 FOXD4L5Q5VV16 416 aaPredicted RBP22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 REXO1Q8N1G1 1221 aaKnown RBP22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 CLEC4DQ8WXI8 215 aa22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 FOXD4L4Q8WXT5 416 aaPredicted RBP22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 AGBL1Q96MI9 1066 aa22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 PTPN18Q99952 460 aa22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 MAP3K20Q9NYL2 800 aaKnown RBP22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.28■■□□□ 1.16
CHMP2B-204ENST00000472024 SMCHD1A6NHR9 2005 aa22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 MEIS2O14770 477 aa22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 CNMDO75829 334 aa22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 KRT25Q7Z3Z0 450 aa22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 RAVER2Q9HCJ3 691 aaKnown RBP22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 ABT1Q9ULW3 272 aaKnown RBP22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 RABGAP1Q9Y3P9 1069 aa22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 MORC2Q9Y6X9 1032 aaPredicted RBP22.27■■□□□ 1.16
CHMP2B-204ENST00000472024 PDHXO00330 501 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 AP3B2Q13367 1082 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 USH1GQ495M9 461 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 RILPL1Q5EBL4 403 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 RIOX2Q8IUF8 465 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 FAM43AQ8N2R8 423 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 GBP4Q96PP9 640 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 BTBD7Q9P203 1132 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 CEP350Q5VT06 3117 aa22.26■■□□□ 1.15
CHMP2B-204ENST00000472024 COPB2P35606 906 aa22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 HSD17B4P51659 736 aa22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 GNL2Q13823 731 aaKnown RBP22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 EARS2Q5JPH6 523 aaKnown RBP22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 TMEM87AQ8NBN3 555 aa22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 RBPJLQ9UBG7 517 aa22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 CTDP1Q9Y5B0 961 aaPredicted RBP22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 ADGRA2Q96PE1 1338 aa22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 RBBP6Q7Z6E9 1792 aaKnown RBP22.25■■□□□ 1.15
CHMP2B-204ENST00000472024 FOSP01100 380 aaPredicted RBP22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 STAT3P40763 770 aa22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 TM4SF4P48230 202 aa22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 GCLCP48506 637 aaPredicted RBP22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 TOB1P50616 345 aaPredicted RBP22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 DNM1Q05193 864 aaKnown RBP22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 MKRN3Q13064 507 aaKnown RBP22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 FAM173BQ6P4H8 233 aa22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 MCF2L2Q86YR7 1114 aa22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 CHST13Q8NET6 341 aa22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 ZNF396Q96N95 335 aaPredicted RBP22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 PARK7Q99497 189 aaKnown RBP22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 POLR3EQ9NVU0 708 aa22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 MORF4L1Q9UBU8 362 aa22.24■■□□□ 1.15
CHMP2B-204ENST00000472024 TAL1P17542 331 aaPredicted RBP22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 NASPP49321 788 aaPredicted RBP22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 KRT85P78386 507 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 SREBF2Q12772 1141 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 SNRNP48Q6IEG0 339 aaKnown RBP22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 CPXCR1Q8N123 301 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 RASGRP4Q8TDF6 673 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 CRYGNQ8WXF5 182 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 SPATC1LQ9H0A9 340 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 RTEL1Q9NZ71 1219 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 CFAP45Q9UL16 551 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 RIPK3Q9Y572 518 aa22.23■■□□□ 1.15
CHMP2B-204ENST00000472024 CCDC194A0A1B0GVG4 234 aa22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 GCOM1H8Y6P7 765 aaPredicted RBP22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 IGF2BP3O00425 579 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 SLC25A27O95847 323 aa22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 POLR2MP0CAP2 368 aa22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 ORC2Q13416 577 aaPredicted RBP22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 NOM1Q5C9Z4 860 aaKnown RBP22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 SAMD1Q6SPF0 538 aaPredicted RBP22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 REM2Q8IYK8 340 aaPredicted RBP22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 SHCBP1Q8NEM2 672 aa22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 TRERF1Q96PN7 1200 aa22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 TXNRD2Q9NNW7 524 aa22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 RNF146Q9NTX7 359 aa22.22■■□□□ 1.15
CHMP2B-204ENST00000472024 FAM205CA6NFA0 338 aa22.21■■□□□ 1.15
CHMP2B-204ENST00000472024 NFIBO00712 420 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms