RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 ACAD9Q9H845 621 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 RNF146Q9NTX7 359 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 PEX10O60683 326 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 CD2BP2O95400 341 aaKnown RBP16.23■□□□□ 0.19
SSR4-207ENST00000471724 SSRP1Q08945 709 aaKnown RBP16.23■□□□□ 0.19
SSR4-207ENST00000471724 Q3C1V9 767 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 USH1GQ495M9 461 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.23■□□□□ 0.19
SSR4-207ENST00000471724 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 SOCS4Q8WXH5 440 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 SNX21Q969T3 373 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 COA7Q96BR5 231 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
SSR4-207ENST00000471724 SLC26A6Q9BXS9 759 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 MAF1Q9H063 256 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 LCTP09848 1927 aa16.23■□□□□ 0.19
SSR4-207ENST00000471724 PRPF3O43395 683 aaKnown RBP16.22■□□□□ 0.19
SSR4-207ENST00000471724 STRNO43815 780 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 DEXIO95424 95 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
SSR4-207ENST00000471724 PSMC4P43686 418 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 SLC4A3P48751 1232 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 PPP1R18Q6NYC8 613 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 PLEKHH3Q7Z736 793 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 CCDC83Q8IWF9 413 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 ABRAQ8N0Z2 381 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 PIBF1Q8WXW3 757 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 PHKBQ93100 1093 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 TMX3Q96JJ7 454 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 TRERF1Q96PN7 1200 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 HOMER2Q9NSB8 354 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
SSR4-207ENST00000471724 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
SSR4-207ENST00000471724 PFASO15067 1338 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 PTPDC1A2A3K4 754 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 K7ELQ4 463 aaPredicted RBP16.21■□□□□ 0.19
SSR4-207ENST00000471724 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
SSR4-207ENST00000471724 FCER1AP12319 257 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 SCG2P13521 617 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 HOXD10P28358 340 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 PRMT2P55345 433 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 KCTD2Q14681 263 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 PFKFB3Q16875 520 aaPredicted RBP16.21■□□□□ 0.19
SSR4-207ENST00000471724 HEATR3Q7Z4Q2 680 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.19
SSR4-207ENST00000471724 WASF1Q92558 559 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 TRIM47Q96LD4 638 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 RIPK3Q9Y572 518 aa16.21■□□□□ 0.19
SSR4-207ENST00000471724 V9GY48 417 aaPredicted RBP16.21■□□□□ 0.19
SSR4-207ENST00000471724 SLC15A5A6NIM6 579 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 HMGN5P82970 282 aaKnown RBP16.2■□□□□ 0.18
SSR4-207ENST00000471724 ST3GAL1Q11201 340 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 MCF2L2Q86YR7 1114 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 TEX2Q8IWB9 1127 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 FAM177A1Q8N128 213 aaPredicted RBP16.2■□□□□ 0.18
SSR4-207ENST00000471724 NSUN7Q8NE18 718 aaKnown RBP16.2■□□□□ 0.18
SSR4-207ENST00000471724 CCDC148Q8NFR7 591 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 MMP19Q99542 508 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 PTPN22Q9Y2R2 807 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
SSR4-207ENST00000471724 hCG_1642624A0A1W2PR95 340 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 XBP1P17861 261 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 PTPREP23469 700 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 GRB14Q14449 540 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 MUM1L1Q5H9M0 696 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 ANKRD35Q8N283 1001 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 GPKOWQ92917 476 aaPredicted RBP eCLIP16.19■□□□□ 0.18
SSR4-207ENST00000471724 NUDT12Q9BQG2 462 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 ARHGAP39Q9C0H5 1083 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 BARHL2Q9NY43 387 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 SLC5A4Q9NY91 659 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 LRRC37A2A6NM11 1700 aa16.19■□□□□ 0.18
SSR4-207ENST00000471724 NFIBO00712 420 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 CTDNEP1O95476 244 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 ADORA2AP29274 412 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 CTGFP29279 349 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 RGS2P41220 211 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 NAPAP54920 295 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 RGS22Q8NE09 1264 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 APBA2Q99767 749 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 GLT8D2Q9H1C3 349 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 A1CFQ9NQ94 594 aaKnown RBP16.18■□□□□ 0.18
SSR4-207ENST00000471724 SH3GLB2Q9NR46 395 aa16.18■□□□□ 0.18
SSR4-207ENST00000471724 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
SSR4-207ENST00000471724 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
SSR4-207ENST00000471724 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.18■□□□□ 0.18
SSR4-207ENST00000471724 ESYT2A0FGR8 921 aa16.17■□□□□ 0.18
SSR4-207ENST00000471724 STXBP3O00186 592 aa16.17■□□□□ 0.18
SSR4-207ENST00000471724 ECM2O94769 699 aaPredicted RBP16.17■□□□□ 0.18
SSR4-207ENST00000471724 TAL1P17542 331 aaPredicted RBP16.17■□□□□ 0.18
SSR4-207ENST00000471724 GHRHRQ02643 423 aa16.17■□□□□ 0.18
SSR4-207ENST00000471724 MAP2K5Q13163 448 aa16.17■□□□□ 0.18
SSR4-207ENST00000471724 PKN1Q16512 942 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms