RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ZNFX1Q9P2E3 1918 aaKnown RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 CYP2D7A0A087X1C5 515 aa10.9□□□□□ -0.66
CPSF4-211ENST00000471455 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 ZBED4O75132 1171 aa10.9□□□□□ -0.66
CPSF4-211ENST00000471455 ZNF865P0CJ78 1059 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 ACLYP53396 1101 aa10.9□□□□□ -0.66
CPSF4-211ENST00000471455 LRRFIP1Q32MZ4 808 aaKnown RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 SNRNP48Q6IEG0 339 aaKnown RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
CPSF4-211ENST00000471455 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 MYLIPQ8WY64 445 aa10.9□□□□□ -0.66
CPSF4-211ENST00000471455 GPATCH3Q96I76 525 aa10.9□□□□□ -0.66
CPSF4-211ENST00000471455 SYNPO2Q9UMS6 1093 aa10.9□□□□□ -0.66
CPSF4-211ENST00000471455 COL11A1P12107 1806 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-211ENST00000471455 ELP1O95163 1332 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 ATP2A1O14983 1001 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 TLR3O15455 904 aaKnown RBP10.89□□□□□ -0.67
CPSF4-211ENST00000471455 ADAMTS4O75173 837 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 DUSP11O75319 330 aaKnown RBP10.89□□□□□ -0.67
CPSF4-211ENST00000471455 CST5P28325 142 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-211ENST00000471455 PPIGQ13427 754 aaKnown RBP eCLIP10.89□□□□□ -0.674e-6■□□□□ 10.4
CPSF4-211ENST00000471455 SBK1Q52WX2 424 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
CPSF4-211ENST00000471455 CTR9Q6PD62 1173 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 MAMDC4Q6UXC1 1216 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.89□□□□□ -0.67
CPSF4-211ENST00000471455 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 LRRCC1Q9C099 1032 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 MTIF3Q9H2K0 278 aaKnown RBP10.89□□□□□ -0.67
CPSF4-211ENST00000471455 TTYH1Q9H313 450 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-211ENST00000471455 ZBTB40Q9NUA8 1239 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 NYAP2Q9P242 653 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 SMCHD1A6NHR9 2005 aa10.89□□□□□ -0.67
CPSF4-211ENST00000471455 A0A0U1RQG5 324 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-211ENST00000471455 F5H6K3 240 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 NDUFB10O96000 172 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 TIMP1P01033 207 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 FDX1P10109 184 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 TAL1P17542 331 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-211ENST00000471455 GNAT2P19087 354 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 DNAJB2P25686 324 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 OAZ1P54368 228 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 KLRC3Q07444 240 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 PSRC1Q6PGN9 363 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-211ENST00000471455 ZNF444Q8N0Y2 327 aaPredicted RBP10.88□□□□□ -0.67
CPSF4-211ENST00000471455 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 TMEM199Q8N511 208 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 CHST13Q8NET6 341 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 TIFAQ96CG3 184 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 ABHD16BQ9H3Z7 469 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 FEM1BQ9UK73 627 aa10.88□□□□□ -0.67
CPSF4-211ENST00000471455 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 SLC3A2P08195 630 aaKnown RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 C6orf222P0C671 652 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 RASA1P20936 1047 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 TDO2P48775 406 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 FAAP100Q0VG06 881 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 ACVR2BQ13705 512 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 KCNA10Q16322 511 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 MFSD5Q6N075 450 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 KLHDC9Q8NEP7 349 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 APPBP2Q92624 585 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 KIFC2Q96AC6 838 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 LENG1Q96BZ8 264 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 GAS2L1Q99501 681 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 SEZ6LQ9BYH1 1024 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 NACAP1Q9BZK3 213 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 PUS7LQ9H0K6 701 aaKnown RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 ECHDC1Q9NTX5 307 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 TBX21Q9UL17 535 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
CPSF4-211ENST00000471455 GREB1LQ9C091 1923 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-211ENST00000471455 DNAJC25-GNG10A0A024R161 153 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 MINDY4BA8MYZ0 360 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 SNAI1O95863 264 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-211ENST00000471455 TTLL1O95922 423 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 ITGB8P26012 769 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 EPHB4P54760 987 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 SLFNL1Q499Z3 407 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 TJAP1Q5JTD0 557 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 SIRT2Q8IXJ6 389 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 CPXCR1Q8N123 301 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 GMCL1P1Q8NEA9 526 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 STRBPQ96SI9 672 aaKnown RBP10.86□□□□□ -0.67
CPSF4-211ENST00000471455 NUP88Q99567 741 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-211ENST00000471455 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPSF4-211ENST00000471455 UPF3AQ9H1J1 476 aaKnown RBP10.86□□□□□ -0.67
CPSF4-211ENST00000471455 ZNF576Q9H609 170 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 SLC38A10Q9HBR0 1119 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 CLIP2Q9UDT6 1046 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 ISY1Q9ULR0 285 aaKnown RBP10.86□□□□□ -0.67
CPSF4-211ENST00000471455 DNAH12Q6ZR08 3092 aa10.86□□□□□ -0.67
CPSF4-211ENST00000471455 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
CPSF4-211ENST00000471455 ARVCFO00192 962 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms