RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 MASP1P48740 699 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 CDK5R2Q13319 367 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 PRSS36Q5K4E3 855 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 SYTL5Q8TDW5 730 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-204ENST00000471245 MFSD3Q96ES6 412 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 DUSP23Q9BVJ7 150 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 LGR6Q9HBX8 967 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 PCDH12Q9NPG4 1184 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 KIDINS220Q9ULH0 1771 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 LRRIQ1Q96JM4 1722 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 ITSN2Q9NZM3 1697 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 MYO3AQ8NEV4 1616 aa7.89□□□□□ -1.15
CKS1B-204ENST00000471245 ZNF335Q9H4Z2 1342 aaPredicted RBP7.88□□□□□ -1.15
CKS1B-204ENST00000471245 ZNF445P59923 1031 aa7.88□□□□□ -1.15
CKS1B-204ENST00000471245 SUMO1P63165 101 aaKnown RBP7.88□□□□□ -1.15
CKS1B-204ENST00000471245 GRB10Q13322 594 aa7.88□□□□□ -1.15
CKS1B-204ENST00000471245 FNDC3BQ53EP0 1204 aaKnown RBP7.88□□□□□ -1.15
CKS1B-204ENST00000471245 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
CKS1B-204ENST00000471245 NIM1KQ8IY84 436 aa7.88□□□□□ -1.15
CKS1B-204ENST00000471245 GATA6Q92908 595 aa7.88□□□□□ -1.15
CKS1B-204ENST00000471245 MRPL4Q9BYD3 311 aaKnown RBP7.88□□□□□ -1.15
CKS1B-204ENST00000471245 CGGBP1Q9UFW8 167 aaPredicted RBP7.88□□□□□ -1.15
CKS1B-204ENST00000471245 TPX2Q9ULW0 747 aaKnown RBP7.88□□□□□ -1.15
CKS1B-204ENST00000471245 AKT3Q9Y243 479 aa7.88□□□□□ -1.15
CKS1B-204ENST00000471245 ITGB7P26010 798 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 L1CAMP32004 1257 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 KIR3DL1P43629 444 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 ANAPC15P60006 121 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 CYP27A1Q02318 531 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 PABPC4Q13310 644 aaKnown RBP eCLIP7.87□□□□□ -1.15
CKS1B-204ENST00000471245 TM4SF20Q53R12 229 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 FAM209AQ5JX71 171 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 EFCAB2Q5VUJ9 269 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 YOD1Q5VVQ6 348 aaPredicted RBP7.87□□□□□ -1.15
CKS1B-204ENST00000471245 ZAR1Q86SH2 424 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 PRDM14Q9GZV8 571 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 PRDM5Q9NQX1 630 aaPredicted RBP7.87□□□□□ -1.15
CKS1B-204ENST00000471245 FBXL21Q9UKT6 434 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 DIS3Q9Y2L1 958 aaKnown RBP7.87□□□□□ -1.15
CKS1B-204ENST00000471245 ARHGAP5Q13017 1502 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 MLH3Q9UHC1 1453 aa7.87□□□□□ -1.15
CKS1B-204ENST00000471245 CLTCQ00610 1675 aaKnown RBP7.86□□□□□ -1.15
CKS1B-204ENST00000471245 TBX1O43435 398 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 PABPC1P11940 636 aaKnown RBP7.86□□□□□ -1.15
CKS1B-204ENST00000471245 NOL9Q5SY16 702 aaKnown RBP7.86□□□□□ -1.15
CKS1B-204ENST00000471245 OGFOD3Q6PK18 319 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 NSMFQ6X4W1 530 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 KRT26Q7Z3Y9 468 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 AFAP1Q8N556 730 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 ADCY4Q8NFM4 1077 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 OSBP2Q969R2 916 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 METTL22Q9BUU2 404 aaPredicted RBP7.86□□□□□ -1.15
CKS1B-204ENST00000471245 KCNH3Q9ULD8 1083 aa7.86□□□□□ -1.15
CKS1B-204ENST00000471245 POLR1AO95602 1720 aaPredicted RBP7.86□□□□□ -1.15
CKS1B-204ENST00000471245 PREX2Q70Z35 1606 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 PRODHO43272 600 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 SIGLEC6O43699 453 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 FAM87AP0C7U9 286 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 TRIM61Q5EBN2 209 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 SFRP5Q5T4F7 317 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 ZDHHC13Q8IUH4 622 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 FIBCD1Q8N539 461 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 DTWD2Q8NBA8 298 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 LGR4Q9BXB1 951 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 NOL6Q9H6R4 1146 aaKnown RBP7.85□□□□□ -1.15
CKS1B-204ENST00000471245 RNF112Q9ULX5 631 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 SF3B6Q9Y3B4 125 aaKnown RBP7.85□□□□□ -1.15
CKS1B-204ENST00000471245 NPATQ14207 1427 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 CNTLNQ9NXG0 1405 aa7.85□□□□□ -1.15
CKS1B-204ENST00000471245 CEP170BQ9Y4F5 1589 aaPredicted RBP7.84□□□□□ -1.15
CKS1B-204ENST00000471245 ABCC1P33527 1531 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 PLA2R1Q13018 1463 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 TCOF1Q13428 1488 aaKnown RBP7.84□□□□□ -1.15
CKS1B-204ENST00000471245 KCNQ2O43526 872 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 LEFTY1O75610 366 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 ZNF865P0CJ78 1059 aaPredicted RBP7.84□□□□□ -1.15
CKS1B-204ENST00000471245 HSPA1LP34931 641 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 GRIA2P42262 883 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 AMPD3Q01432 767 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 MAP4K2Q12851 820 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 SNW1Q13573 536 aaKnown RBP7.84□□□□□ -1.15
CKS1B-204ENST00000471245 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 FAM214BQ7L5A3 538 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 BTN2A2Q8WVV5 523 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 CCDC140Q96MF4 163 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 TBC1D32Q96NH3 1257 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 IER2Q9BTL4 223 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 GFOD1Q9NXC2 390 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
CKS1B-204ENST00000471245 CDC42BPAQ5VT25 1732 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 IGF2BP3O00425 579 aaKnown RBP eCLIP7.83□□□□□ -1.16
CKS1B-204ENST00000471245 LRRN2O75325 713 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 F13BP05160 661 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 SCG5P05408 212 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 ADMP35318 185 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 GFRA1P56159 465 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 CBX2Q14781 532 aaPredicted RBP7.83□□□□□ -1.16
CKS1B-204ENST00000471245 DUSP27Q5VZP5 1158 aa7.83□□□□□ -1.16
CKS1B-204ENST00000471245 GTF2IRD2BQ6EKJ0 949 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms