RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 TMEM39AQ9NV64 488 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 GPN3Q9UHW5 284 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-208ENST00000470994 LY75O60449 1722 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 PXDNLA1KZ92 1463 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 ADCY9O60503 1353 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 KRTAP9-7A8MTY7 169 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 POLRMTO00411 1230 aaKnown RBP7.74□□□□□ -1.17
GPNMB-208ENST00000470994 NFIBO00712 420 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 NPHP1O15259 732 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 STARD3NLO95772 234 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 SERPINB2P05120 415 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 NEFMP07197 916 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 ZSCAN22P10073 491 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-208ENST00000470994 TM4SF1P30408 202 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 ERVK-24P63145 666 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 FAAP100Q0VG06 881 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 TEFQ10587 303 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 NFIXQ14938 502 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 KIRREL1Q96J84 757 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 PPP4R2Q9NY27 417 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 LMCD1Q9NZU5 365 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 NARFQ9UHQ1 456 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 ZBTB1Q9Y2K1 713 aa7.74□□□□□ -1.17
GPNMB-208ENST00000470994 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 SHANK3Q9BYB0 1731 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 A0A087WZG4 1122 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 ORC1Q13415 861 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 TMEM67Q5HYA8 995 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 DTHD1Q6ZMT9 781 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 C2CD5Q86YS7 1000 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 GLYCTKQ8IVS8 523 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 SPACA3Q8IXA5 215 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 ZNF622Q969S3 477 aaKnown RBP eCLIP7.73□□□□□ -1.17
GPNMB-208ENST00000470994 CCDC74AQ96AQ1 378 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 HEXIM2Q96MH2 286 aaKnown RBP7.73□□□□□ -1.17
GPNMB-208ENST00000470994 RAPGEFL1Q9UHV5 662 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 NCANO14594 1321 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 SOS1Q07889 1333 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-208ENST00000470994 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
GPNMB-208ENST00000470994 C10orf71Q711Q0 1435 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 H0YIN7 160 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 PRRG2O14669 202 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 ICMTO60725 284 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 B4GALNT3Q6L9W6 998 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 C1QL4Q86Z23 238 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 TTLL6Q8N841 843 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 ZNF496Q96IT1 587 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-208ENST00000470994 CFAP53Q96M91 514 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 EMILIN2Q9BXX0 1053 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 PRDM10Q9NQV6 1147 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 C5P01031 1676 aa7.72□□□□□ -1.17
GPNMB-208ENST00000470994 KIF20BQ96Q89 1820 aa7.71□□□□□ -1.17
GPNMB-208ENST00000470994 CICQ96RK0 1608 aaPredicted RBP7.71□□□□□ -1.17
GPNMB-208ENST00000470994 B8ZZF3 427 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.71□□□□□ -1.18
GPNMB-208ENST00000470994 XRCC5P13010 732 aaKnown RBP7.71□□□□□ -1.18
GPNMB-208ENST00000470994 HTRA3P83110 453 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 ZC3H12AQ5D1E8 599 aaKnown RBP7.71□□□□□ -1.18
GPNMB-208ENST00000470994 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 FBXO15Q8NCQ5 510 aaPredicted RBP7.71□□□□□ -1.18
GPNMB-208ENST00000470994 IL17REQ8NFR9 667 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 CCDC120Q96HB5 630 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 TEX13AQ9BXU3 409 aaPredicted RBP7.71□□□□□ -1.18
GPNMB-208ENST00000470994 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 PICK1Q9NRD5 415 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 NUDCQ9Y266 331 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 CHD4Q14839 1912 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 QSER1Q2KHR3 1735 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 TOGARAM1Q9Y4F4 1720 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 TUBGCP6Q96RT7 1819 aa7.71□□□□□ -1.18
GPNMB-208ENST00000470994 H3BRB1 525 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 KCNQ3O43525 872 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 A1BGP04217 495 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 U2AF1L5P0DN76 240 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-208ENST00000470994 LMNB1P20700 586 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 PRKAR2BP31323 418 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 U2AF1Q01081 240 aaKnown RBP eCLIP7.7□□□□□ -1.18
GPNMB-208ENST00000470994 TBC1D9BQ66K14 1250 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 ZNF790Q6PG37 636 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 PRR23BQ6ZRT6 265 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 SULF2Q8IWU5 870 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 FAM129BQ96TA1 746 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 TUT1Q9H6E5 874 aaKnown RBP7.7□□□□□ -1.18
GPNMB-208ENST00000470994 PITPNM2Q9BZ72 1349 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 COL15A1P39059 1388 aa7.7□□□□□ -1.18
GPNMB-208ENST00000470994 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
GPNMB-208ENST00000470994 EIF1AYO14602 144 aaKnown RBP7.69□□□□□ -1.18
GPNMB-208ENST00000470994 PIP4K2AP48426 406 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-208ENST00000470994 EIF5P55010 431 aaKnown RBP7.69□□□□□ -1.18
GPNMB-208ENST00000470994 GRM2Q14416 872 aa7.69□□□□□ -1.18
GPNMB-208ENST00000470994 FYB2Q5VWT5 728 aa7.69□□□□□ -1.18
GPNMB-208ENST00000470994 PHLDB3Q6NSJ2 640 aa7.69□□□□□ -1.18
GPNMB-208ENST00000470994 SMC1BQ8NDV3 1235 aa7.69□□□□□ -1.18
GPNMB-208ENST00000470994 RTF1Q92541 710 aaKnown RBP7.69□□□□□ -1.18
GPNMB-208ENST00000470994 PHACTR3Q96KR7 559 aa7.69□□□□□ -1.18
GPNMB-208ENST00000470994 SETDB2Q96T68 719 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms