RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 CASZ1Q86V15 1759 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 GFRA2O00451 464 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 HYAL3O43820 417 aaPredicted RBP8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 COBLO75128 1261 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 ETF1P62495 437 aaKnown RBP8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 LMNB2Q03252 620 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 OGFOD3Q6PK18 319 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 TOP6BLQ8N6T0 577 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 PSMG3-AS1Q96PY0 264 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 METTL22Q9BUU2 404 aaPredicted RBP8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 MTFR1LQ9H019 292 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 GGT7Q9UJ14 662 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 LRP5O75197 1615 aa8.94□□□□□ -0.98
PTP4A1-202ENST00000470661 F13A1P00488 732 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 GRK4P32298 578 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 C1orf141Q5JVX7 400 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 SNAP47Q5SQN1 464 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 DUSP27Q5VZP5 1158 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 NLGN2Q8NFZ4 835 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 ZNF507Q8TCN5 953 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 SYT17Q9BSW7 474 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 WNT10AQ9GZT5 417 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 ZFP64Q9NPA5 681 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 PCMTD2Q9NV79 361 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 PAPPAQ13219 1627 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 PKD1L3Q7Z443 1732 aa8.93□□□□□ -0.98
PTP4A1-202ENST00000470661 TUBGCP6Q96RT7 1819 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 RGPD3A6NKT7 1758 aaPredicted RBP8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 RGPD4Q7Z3J3 1758 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 LOC100996750A0A140TA64 210 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 RNMTO43148 476 aaKnown RBP8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 CYP26A1O43174 497 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 KCNQ3O43525 872 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 FOSL1P15407 271 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 GRIK1P39086 918 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 CYP27A1Q02318 531 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 RPL6Q02878 288 aaKnown RBP8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 PWP1Q13610 501 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 NKG7Q16617 165 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 AMOTQ4VCS5 1084 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 ARMCX6Q7L4S7 300 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 HS2ST1Q7LGA3 356 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 GOLM1Q8NBJ4 401 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 SMARCC1Q92922 1105 aaPredicted RBP8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 DUSP23Q9BVJ7 150 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 KRTAP4-6Q9BYQ5 205 aa8.92□□□□□ -0.98
PTP4A1-202ENST00000470661 LY75O60449 1722 aa8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 COL3A1P02461 1466 aaPredicted RBP8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 FAM221AA4D161 298 aa8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 ERVV-2B6SEH9 535 aa8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 U2AF1L5P0DN76 240 aaPredicted RBP8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 PRKAR2BP31323 418 aa8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 U2AF1Q01081 240 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 DCTN1Q14203 1278 aa8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 CPSF6Q16630 551 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 FBXO27Q8NI29 283 aa8.91□□□□□ -0.98
PTP4A1-202ENST00000470661 KDRP35968 1356 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 UNCXA6NJT0 531 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 CILPO75339 1184 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 BPNT1O95861 308 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 RECKO95980 971 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 GARTP22102 1010 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 SLBPQ14493 270 aaKnown RBP eCLIP8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 INTS5Q6P9B9 1019 aaKnown RBP8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 CCDC84Q86UT8 332 aaPredicted RBP8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 DNAJC10Q8IXB1 793 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 FAM181AQ8N9Y4 354 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 GATAD2BQ8WXI9 593 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 MIS18AQ9NYP9 233 aa8.9□□□□□ -0.98
PTP4A1-202ENST00000470661 KIAA1324LA8MWY0 1029 aaPredicted RBP8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 ZNF76P36508 570 aa8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 CYP27C1Q4G0S4 372 aa8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 KCT2Q8NC54 265 aa8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 MRRFQ96E11 262 aaKnown RBP8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 SLC52A2Q9HAB3 445 aa8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 PRDM10Q9NQV6 1147 aa8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 SRP68Q9UHB9 627 aaKnown RBP8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 CORINQ9Y5Q5 1042 aa8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 U3KQE9 123 aa8.89□□□□□ -0.99
PTP4A1-202ENST00000470661 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 TLR3O15455 904 aaKnown RBP8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 PGRP06401 933 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 SPINK2P20155 84 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 POLD1P28340 1107 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 PIP4K2AP48426 406 aaPredicted RBP8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 FANCCQ00597 558 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 FBXL19Q6PCT2 694 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 MCM10Q7L590 875 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 HID1Q8IV36 788 aa8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 DPH2Q9BQC3 489 aaPredicted RBP8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 THUMPD2Q9BTF0 503 aaKnown RBP8.88□□□□□ -0.99
PTP4A1-202ENST00000470661 TAF1LQ8IZX4 1826 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 MYH14Q7Z406 1995 aaKnown RBP8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 PRAMEF22A3QJZ6 481 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 ADAMTS4O75173 837 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 LRIG2O94898 1065 aa8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 EIF4A3P38919 411 aaKnown RBP8.87□□□□□ -0.99
PTP4A1-202ENST00000470661 CRKLP46109 303 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms