RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 NHLH1Q02575 133 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 TAP1Q03518 808 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 GRB10Q13322 594 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 PUS10Q3MIT2 529 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 KRT40Q6A162 431 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 DEFB128Q7Z7B8 93 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 TRMT2AQ8IZ69 625 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 EAF2Q96CJ1 260 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 FTOQ9C0B1 505 aaKnown RBP eCLIP10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 NOP58Q9Y2X3 529 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 RIPK3Q9Y572 518 aa10.66□□□□□ -0.7
SYNGAP1-205ENST00000470232 ZNF532Q9HCE3 1301 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 USP17L12C9JPN9 530 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 USP17L21D6R901 530 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 KCNJ6P48051 423 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 OAZ1P54368 228 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 C12orf60Q5U649 245 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 C16orf86Q6ZW13 317 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 ERC1Q8IUD2 1116 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 HERC6Q8IVU3 1022 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 FAM178BQ8IXR5 827 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 POLR3EQ9NVU0 708 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 TLR7Q9NYK1 1049 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 FEM1BQ9UK73 627 aa10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 GNEQ9Y223 722 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-205ENST00000470232 GRIN2DO15399 1336 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 EPOPA6NHQ4 379 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 F5H6K3 240 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 BCAR3O75815 825 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 EVX2Q03828 476 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 KLRC3Q07444 240 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 LEXMQ3ZCV2 418 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 BRDTQ58F21 947 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 LCORLQ8N3X6 602 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 ZBED2Q9BTP6 218 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 KATNBL1Q9H079 304 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 UBE2ZQ9H832 354 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 SLC38A10Q9HBR0 1119 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 RAVER2Q9HCJ3 691 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 CD320Q9NPF0 282 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 NYAP2Q9P242 653 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 FAM50BQ9Y247 325 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 COG6Q9Y2V7 657 aa10.64□□□□□ -0.71
SYNGAP1-205ENST00000470232 ZNF536O15090 1300 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 TNKSO95271 1327 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 MCM3APO60318 1980 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 PSMC6P62333 389 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 BFSP2Q13515 415 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 AACSQ86V21 672 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 FRAT1Q92837 279 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 MFSD14AQ96MC6 490 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 FBXL18Q96ME1 805 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 ACAD9Q9H845 621 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 ARMT1Q9H993 441 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 MKNK2Q9HBH9 465 aa10.63□□□□□ -0.71
SYNGAP1-205ENST00000470232 ASTN1O14525 1302 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 DCXO43602 365 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 CYP2C9P11712 490 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 TRIM27P14373 513 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 SMPD1P17405 629 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 CPT1AP50416 773 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 CNTN2Q02246 1040 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 PTCRAQ6ISU1 281 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 FAM133AQ8N9E0 248 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 VWCEQ96DN2 955 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 FGD4Q96M96 766 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 CRBNQ96SW2 442 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 UPF3BQ9BZI7 483 aaKnown RBP10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.62□□□□□ -0.711e-6■■■■□ 20.5
SYNGAP1-205ENST00000470232 TRMT13Q9NUP7 481 aaKnown RBP10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 CTNNA3Q9UI47 895 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 NOD1Q9Y239 953 aa10.62□□□□□ -0.71
SYNGAP1-205ENST00000470232 WDFY4Q6ZS81 3184 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 TCRBV5S4A2TA0A5A2 114 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 GOLIM4O00461 696 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 PRKAB2O43741 272 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 KPNA6O60684 536 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 LPXNO60711 386 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 MBD4O95243 580 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 NDUFB10O96000 172 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 IQCF3P0C7M6 154 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 KCNA5P22460 613 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 LRRFIP1Q32MZ4 808 aaKnown RBP10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 FAM47CQ5HY64 1035 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 CHURC1Q8WUH1 139 aa10.61□□□□□ -0.71
SYNGAP1-205ENST00000470232 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms