RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TXKP42681 527 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 SLC10A6Q3KNW5 377 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 GTF2IRD2BQ6EKJ0 949 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 GTF2IRD2Q86UP8 949 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 SIRT2Q8IXJ6 389 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 INTS4Q96HW7 963 aaKnown RBP6.15□□□□□ -1.42
BRCA2-202ENST00000470094 MRGPRX3Q96LB0 322 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 JMJD8Q96S16 334 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 LGR4Q9BXB1 951 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 CRTAC1Q9NQ79 661 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 PDE6BP35913 854 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 ARL4AP40617 200 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 CEBPAP49715 358 aaPredicted RBP6.14□□□□□ -1.43
BRCA2-202ENST00000470094 GALK1P51570 392 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 SCRN1Q12765 414 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 OGFOD2Q6N063 350 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 PRR23BQ6ZRT6 265 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 IRF2BP1Q8IU81 584 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 NUP43Q8NFH3 380 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 BTN2A2Q8WVV5 523 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 SHISA4Q96DD7 197 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 DIRC2Q96SL1 478 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 PLCD4Q9BRC7 762 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 NKX2-4Q9H2Z4 354 aa6.14□□□□□ -1.43
BRCA2-202ENST00000470094 NSUN3Q9H649 340 aaKnown RBP6.14□□□□□ -1.43
BRCA2-202ENST00000470094 TRBV23OR9-2A0A075B6M9 112 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 EFEMP2O95967 443 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 PNLIPP16233 465 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 PRKCAP17252 672 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 PAMP19021 973 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 L1CAMP32004 1257 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 LAPTM5Q13571 262 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 EPB41L4BQ9H329 900 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 CYP26B1Q9NR63 512 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 IMPACTQ9P2X3 320 aa6.13□□□□□ -1.43
BRCA2-202ENST00000470094 NPHP3-ACAD11A0A0J9YXS1 232 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 IQCA1LA6NCM1 817 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 OR14I1A6ND48 311 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 TBX1O43435 398 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 FARP2O94887 1054 aaPredicted RBP6.12□□□□□ -1.43
BRCA2-202ENST00000470094 CYP4F8P98187 520 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 RBL2Q08999 1139 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 KIR3DS1Q14943 382 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 ADGRF1Q5T601 910 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 ST13P5Q8NFI4 369 aaPredicted RBP6.12□□□□□ -1.43
BRCA2-202ENST00000470094 COPS5Q92905 334 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 DCP1AQ9NPI6 582 aaPredicted RBP6.12□□□□□ -1.43
BRCA2-202ENST00000470094 SIRPGQ9P1W8 387 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 ACSL6Q9UKU0 697 aa6.12□□□□□ -1.43
BRCA2-202ENST00000470094 A0A1W2PQJ5 194 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 CCDC85CA6NKD9 419 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 THBDP07204 575 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 SNRPB2P08579 225 aaKnown RBP6.11□□□□□ -1.43
BRCA2-202ENST00000470094 PLS3P13797 630 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 HOXC12P31275 282 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 KCNJ6P48051 423 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 CORO7P57737 925 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
BRCA2-202ENST00000470094 POU5F2Q8N7G0 328 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 FBXO15Q8NCQ5 510 aaPredicted RBP6.11□□□□□ -1.43
BRCA2-202ENST00000470094 CCDC140Q96MF4 163 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 SLC38A3Q99624 504 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 GPRC5CQ9NQ84 441 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 CLEC1BQ9P126 229 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 MSRB2Q9Y3D2 182 aa6.11□□□□□ -1.43
BRCA2-202ENST00000470094 A0A1W2PQU0 124 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 PDPK1O15530 556 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 ECI1P42126 302 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 MVKQ03426 396 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 ZNF605Q86T29 641 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 CPNE8Q86YQ8 564 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 PMFBP1Q8TBY8 1022 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 ZNF669Q96BR6 464 aaPredicted RBP6.1□□□□□ -1.43
BRCA2-202ENST00000470094 SGSM3Q96HU1 749 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 FAM84AQ96KN4 292 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 CCDC113Q9H0I3 377 aa6.1□□□□□ -1.43
BRCA2-202ENST00000470094 CPP00450 1065 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 MPOP05164 745 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 ERVFRD-1P60508 538 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 PPP2R2AP63151 447 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 SERINC3Q13530 473 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 RASGRF1Q13972 1273 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 HSP90AA2PQ14568 343 aaPredicted RBP6.09□□□□□ -1.43
BRCA2-202ENST00000470094 MTERF2Q49AM1 385 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 ZNF648Q5T619 568 aaPredicted RBP6.09□□□□□ -1.43
BRCA2-202ENST00000470094 OLFML2BQ68BL8 750 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 LRRC47Q8N1G4 583 aaKnown RBP6.09□□□□□ -1.43
BRCA2-202ENST00000470094 NLGN2Q8NFZ4 835 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 DRC1Q96MC2 740 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 MMP19Q99542 508 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 DNAJC2Q99543 621 aaKnown RBP6.09□□□□□ -1.43
BRCA2-202ENST00000470094 PDLIM7Q9NR12 457 aa6.09□□□□□ -1.43
BRCA2-202ENST00000470094 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 MEFVO15553 781 aaPredicted RBP6.08□□□□□ -1.44
BRCA2-202ENST00000470094 NPHS1O60500 1241 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 SCG5P05408 212 aa6.08□□□□□ -1.44
BRCA2-202ENST00000470094 MSL3P1P0C860 447 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms