RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 CHST13Q8NET6 341 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.61□□□□□ -0.23
FAM228B-203ENST00000469867 PQBP1O60828 265 aaKnown RBP13.61□□□□□ -0.23
FAM228B-203ENST00000469867 ADAMTS4O75173 837 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 ALAS1P13196 640 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 ACVR2BQ13705 512 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 SNX17Q15036 470 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 MSL3Q8N5Y2 521 aaKnown RBP13.61□□□□□ -0.23
FAM228B-203ENST00000469867 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 ACAD9Q9H845 621 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 A1CFQ9NQ94 594 aaKnown RBP13.61□□□□□ -0.23
FAM228B-203ENST00000469867 PDLIM7Q9NR12 457 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 RNF146Q9NTX7 359 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 PHF24Q9UPV7 400 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 TRIM43BA6NCK2 446 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 MYADML2A6NDP7 307 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 SLC16A2P36021 539 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 MRE11P49959 708 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 CCDC96Q2M329 555 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 RCSD1Q6JBY9 416 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 FAM160B2Q86V87 743 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 BADQ92934 168 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 TRIM43Q96BQ3 446 aaPredicted RBP13.6□□□□□ -0.23
FAM228B-203ENST00000469867 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 PRR12Q9ULL5 1215 aa13.6□□□□□ -0.23
FAM228B-203ENST00000469867 ORC4O43929 436 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 C6orf222P0C671 652 aaPredicted RBP13.59□□□□□ -0.23
FAM228B-203ENST00000469867 ITGB8P26012 769 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 ALX1Q15699 326 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 ABHD16BQ9H3Z7 469 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 REC8O95072 547 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 FDX1P10109 184 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 ACLYP53396 1101 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 KCNA10Q16322 511 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 PPP4R3BQ5MIZ7 849 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
FAM228B-203ENST00000469867 CHD7Q9P2D1 2997 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 CHD9Q3L8U1 2897 aa13.59□□□□□ -0.23
FAM228B-203ENST00000469867 SGSM2O43147 1006 aa13.58□□□□□ -0.23
FAM228B-203ENST00000469867 FGRP09769 529 aa13.58□□□□□ -0.23
FAM228B-203ENST00000469867 MUM1L1Q5H9M0 696 aa13.58□□□□□ -0.23
FAM228B-203ENST00000469867 C9orf50Q5SZB4 431 aa13.58□□□□□ -0.23
FAM228B-203ENST00000469867 FAM161BQ96MY7 647 aa13.58□□□□□ -0.23
FAM228B-203ENST00000469867 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.23
FAM228B-203ENST00000469867 STARD7Q9NQZ5 370 aa13.58□□□□□ -0.23
FAM228B-203ENST00000469867 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
FAM228B-203ENST00000469867 DUSP11O75319 330 aaKnown RBP13.58□□□□□ -0.24
FAM228B-203ENST00000469867 PTGS1P23219 599 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 SHHQ15465 462 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 C1orf53Q5VUE5 145 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 NSMFQ6X4W1 530 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
FAM228B-203ENST00000469867 FAM133AQ8N9E0 248 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 CCPG1Q9ULG6 757 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 LTBP2Q14767 1821 aa13.58□□□□□ -0.24
FAM228B-203ENST00000469867 PTH1RQ03431 593 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 MYO9BQ13459 2157 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 MFSD6Q6ZSS7 791 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.57□□□□□ -0.24
FAM228B-203ENST00000469867 EEPD1Q7L9B9 569 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 TBC1D10CQ8IV04 446 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 ASTN1O14525 1302 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 SOWAHBA6NEL2 793 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 PLA2G6O60733 806 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 CLTBP09497 229 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 NOVP48745 357 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 COL9A3Q14050 684 aaPredicted RBP13.57□□□□□ -0.24
FAM228B-203ENST00000469867 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 ZKSCAN3Q9BRR0 538 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 CHMP5Q9NZZ3 219 aa13.57□□□□□ -0.24
FAM228B-203ENST00000469867 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.56□□□□□ -0.24
FAM228B-203ENST00000469867 ASGR1P07306 291 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 TOP1P11387 765 aaKnown RBP13.56□□□□□ -0.24
FAM228B-203ENST00000469867 AKNAD1Q5T1N1 836 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 CCSAPQ6IQ19 270 aaPredicted RBP13.56□□□□□ -0.24
FAM228B-203ENST00000469867 KLHDC9Q8NEP7 349 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 KATNBL1Q9H079 304 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 MTMR10Q9NXD2 777 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 CYP39A1Q9NYL5 469 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 XIRP2A4UGR9 3374 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 RAG1P15918 1043 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 TNPO1Q92973 898 aaKnown RBP13.56□□□□□ -0.24
FAM228B-203ENST00000469867 TRIM44Q96DX7 344 aaPredicted RBP13.56□□□□□ -0.24
FAM228B-203ENST00000469867 GLT1D1Q96MS3 346 aa13.56□□□□□ -0.24
FAM228B-203ENST00000469867 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
FAM228B-203ENST00000469867 LSG1Q9H089 658 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms