RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CASP7P55210 303 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 RBL2Q08999 1139 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 CHRNA2Q15822 529 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 VPS72Q15906 364 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 TOM1L2Q6ZVM7 507 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 ZAR1Q86SH2 424 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 NME9Q86XW9 330 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 C19orf47Q8N9M1 422 aaKnown RBP8.33□□□□□ -1.08
PTCD3-208ENST00000469585 RIN3Q8TB24 985 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 SLC9A7Q96T83 725 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 DUSP23Q9BVJ7 150 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 PPP1R1BQ9UD71 204 aaPredicted RBP8.33□□□□□ -1.08
PTCD3-208ENST00000469585 PRKAG3Q9UGI9 489 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 CPDO75976 1380 aa8.33□□□□□ -1.08
PTCD3-208ENST00000469585 MON2Q7Z3U7 1717 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 NWD2Q9ULI1 1742 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 NSD3Q9BZ95 1437 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 FAM83GA6ND36 823 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 SMAD7O15105 426 aaKnown RBP8.32□□□□□ -1.08
PTCD3-208ENST00000469585 LEFTY1O75610 366 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 LETMD1Q6P1Q0 360 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 PHACTR4Q8IZ21 702 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 TOP6BLQ8N6T0 577 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 DNAJB8Q8NHS0 232 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 BAHD1Q8TBE0 780 aaPredicted RBP8.32□□□□□ -1.08
PTCD3-208ENST00000469585 UBXN4Q92575 508 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 MFSD14AQ96MC6 490 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 TBC1D32Q96NH3 1257 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 KIF2CQ99661 725 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 MIPEPQ99797 713 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 NSD2O96028 1365 aa8.32□□□□□ -1.08
PTCD3-208ENST00000469585 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
PTCD3-208ENST00000469585 A0A1W2PQH9 124 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 PPM1GO15355 546 aaPredicted RBP8.31□□□□□ -1.08
PTCD3-208ENST00000469585 UBOX5O94941 541 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 EOMESO95936 686 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 FAM87AP0C7U9 286 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 POLR2BP30876 1174 aaKnown RBP8.31□□□□□ -1.08
PTCD3-208ENST00000469585 CCNFP41002 786 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 NFIAQ12857 509 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 OGFOD3Q6PK18 319 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 FAM214BQ7L5A3 538 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 MORC1Q86VD1 984 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 GIMAP7Q8NHV1 300 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
PTCD3-208ENST00000469585 PHRF1Q9P1Y6 1649 aaKnown RBP8.31□□□□□ -1.08
PTCD3-208ENST00000469585 AATKQ6ZMQ8 1374 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 ABCA3Q99758 1704 aa8.31□□□□□ -1.08
PTCD3-208ENST00000469585 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.3□□□□□ -1.08
PTCD3-208ENST00000469585 KLF4O43474 513 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 DYRK3O43781 588 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 IGSF3O75054 1194 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 F13BP05160 661 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 FSTP19883 344 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 ZYXQ15942 572 aaKnown RBP8.3□□□□□ -1.08
PTCD3-208ENST00000469585 TNNI3KQ59H18 835 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 UNC5AQ6ZN44 842 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 TCP11L2Q8N4U5 519 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 DBNDD2Q9BQY9 259 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 TNKS2Q9H2K2 1166 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 PANK3Q9H999 370 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 PLCH1Q4KWH8 1693 aa8.3□□□□□ -1.08
PTCD3-208ENST00000469585 ATRNO75882 1429 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 SLIT2O94813 1529 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 ABCC6O95255 1503 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 FAM170BA6NMN3 283 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 IGLV1-40P01703 118 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 ANKS3Q6ZW76 656 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 NRKQ7Z2Y5 1582 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 PIK3C2AO00443 1686 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 SLIT3O75094 1523 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
PTCD3-208ENST00000469585 SSH2Q76I76 1423 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 KIF7Q2M1P5 1343 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
PTCD3-208ENST00000469585 BCL9LQ86UU0 1499 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 RTL1A6NKG5 1358 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 GSC2O15499 205 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 GBP1P32455 592 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 CDH24Q86UP0 819 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 ARHGEF25Q86VW2 580 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 TMEM192Q8IY95 271 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 FBXL6Q8N531 539 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 RGS17Q9UGC6 210 aaPredicted RBP8.28□□□□□ -1.08
PTCD3-208ENST00000469585 KIF20BQ96Q89 1820 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 CRB1P82279 1406 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 SPATA31A5Q5VU36 1347 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 SPATA31A7Q8IWB4 1347 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 WDR17Q8IZU2 1322 aa8.28□□□□□ -1.08
PTCD3-208ENST00000469585 CD163L1Q9NR16 1453 aa8.27□□□□□ -1.09
PTCD3-208ENST00000469585 KIF24Q5T7B8 1368 aa8.27□□□□□ -1.09
PTCD3-208ENST00000469585 CCDC7Q96M83 1385 aa8.27□□□□□ -1.09
PTCD3-208ENST00000469585 FYB1O15117 783 aa8.27□□□□□ -1.09
PTCD3-208ENST00000469585 TNNT2P45379 298 aaPredicted RBP8.27□□□□□ -1.09
PTCD3-208ENST00000469585 PPP2R5EQ16537 467 aa8.27□□□□□ -1.09
PTCD3-208ENST00000469585 ZNF765Q7L2R6 523 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms