RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CCDC174Q6PII3 467 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 ESR2Q92731 530 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 RILPL2Q969X0 211 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
COL4A3-204ENST00000469504 AGBL1Q96MI9 1066 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 TMEM39AQ9NV64 488 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 CYP39A1Q9NYL5 469 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 CCPG1Q9ULG6 757 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
COL4A3-204ENST00000469504 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 ZEB2O60315 1214 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 NMT2O60551 498 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 PQBP1O60828 265 aaKnown RBP12.91□□□□□ -0.34
COL4A3-204ENST00000469504 ASGR1P07306 291 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 SDSP20132 328 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 CNTN2Q02246 1040 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 NUCB1Q02818 461 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 TNFAIP2Q03169 654 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 GPATCH4Q5T3I0 446 aaKnown RBP12.91□□□□□ -0.34
COL4A3-204ENST00000469504 ZNF697Q5TEC3 545 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 SYDE2Q5VT97 1194 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 IQSEC1Q6DN90 963 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
COL4A3-204ENST00000469504 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 MORC4Q8TE76 937 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 LENG1Q96BZ8 264 aaPredicted RBP12.91□□□□□ -0.34
COL4A3-204ENST00000469504 MPHOSPH6Q99547 160 aaKnown RBP12.91□□□□□ -0.34
COL4A3-204ENST00000469504 TMEM47Q9BQJ4 181 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 VTA1Q9NP79 307 aa12.91□□□□□ -0.34
COL4A3-204ENST00000469504 WDR19Q8NEZ3 1342 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 SMCHD1A6NHR9 2005 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 SOWAHBA6NEL2 793 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 ARVCFO00192 962 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 ZNF213O14771 459 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 TLR3O15455 904 aaKnown RBP12.9□□□□□ -0.34
COL4A3-204ENST00000469504 SNHG28P0DPA3 235 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 PDHBP11177 359 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 CDK7P50613 346 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 FPGSQ05932 587 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 FAAP100Q0VG06 881 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 SHHQ15465 462 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 RRP12Q5JTH9 1297 aaKnown RBP12.9□□□□□ -0.34
COL4A3-204ENST00000469504 GNASQ5JWF2 1037 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 SH3RF1Q7Z6J0 888 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 IQCA1Q86XH1 822 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 DGKHQ86XP1 1220 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 PLEKHM2Q8IWE5 1019 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 INCENPQ9NQS7 918 aa12.9□□□□□ -0.34
COL4A3-204ENST00000469504 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
COL4A3-204ENST00000469504 B4DLN1 442 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 TIMP1P01033 207 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 MRPL12P52815 198 aaKnown RBP12.89□□□□□ -0.35
COL4A3-204ENST00000469504 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 Q7L0L9 218 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 AP5M1Q9H0R1 490 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 CTNNA3Q9UI47 895 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 TBX21Q9UL17 535 aa12.89□□□□□ -0.35
COL4A3-204ENST00000469504 MYADML2A6NDP7 307 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 CTAGE5O15320 804 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 ADCY6O43306 1168 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL4A3-204ENST00000469504 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
COL4A3-204ENST00000469504 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 C9orf50Q5SZB4 431 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 MFSD5Q6N075 450 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 NSMFQ6X4W1 530 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 NOL8Q76FK4 1167 aaKnown RBP12.88□□□□□ -0.35
COL4A3-204ENST00000469504 TLK2Q86UE8 772 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 DNERQ8NFT8 737 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
COL4A3-204ENST00000469504 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
COL4A3-204ENST00000469504 COL6A3P12111 3177 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 NKRFO15226 690 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL4A3-204ENST00000469504 ITGB8P26012 769 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 HAND2P61296 217 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 FSCN1Q16658 493 aaKnown RBP12.87□□□□□ -0.35
COL4A3-204ENST00000469504 IMMTQ16891 758 aaKnown RBP12.87□□□□□ -0.35
COL4A3-204ENST00000469504 TTBK2Q6IQ55 1244 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 TAPT1Q6NXT6 567 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 TBC1D10CQ8IV04 446 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 FAM126BQ8IXS8 530 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 RGS22Q8NE09 1264 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
COL4A3-204ENST00000469504 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
COL4A3-204ENST00000469504 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.86□□□□□ -0.35
COL4A3-204ENST00000469504 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
COL4A3-204ENST00000469504 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.86□□□□□ -0.35
COL4A3-204ENST00000469504 RBM47A0AV96 593 aaKnown RBP12.86□□□□□ -0.35
COL4A3-204ENST00000469504 IGHDP01880 384 aa12.86□□□□□ -0.35
COL4A3-204ENST00000469504 SMPD1P17405 629 aa12.86□□□□□ -0.35
COL4A3-204ENST00000469504 SLC16A2P36021 539 aa12.86□□□□□ -0.35
COL4A3-204ENST00000469504 ALDH5A1P51649 535 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms