RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 KLHL30Q0D2K2 578 aa16.66■□□□□ 0.26
LIMS2-213ENST00000469300 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
LIMS2-213ENST00000469300 UBL4BQ8N7F7 174 aa16.66■□□□□ 0.26
LIMS2-213ENST00000469300 GSDMAQ96QA5 445 aa16.66■□□□□ 0.26
LIMS2-213ENST00000469300 PRPF6O94906 941 aaKnown RBP16.65■□□□□ 0.26
LIMS2-213ENST00000469300 DIP2AQ14689 1571 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 TFDP1Q14186 410 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 PANK4Q9NVE7 773 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
LIMS2-213ENST00000469300 AOC3Q16853 763 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 SFMBT2Q5VUG0 894 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 PPP1R14CQ8TAE6 165 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 CPDO75976 1380 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 DMP1Q13316 513 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-213ENST00000469300 PNOCQ13519 176 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 STK17AQ9UEE5 414 aa16.65■□□□□ 0.26
LIMS2-213ENST00000469300 GAP43P17677 238 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 METTL13Q8N6R0 699 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-213ENST00000469300 PNMA6FA0A0J9YX94 578 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 MMP1P03956 469 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-213ENST00000469300 CD19P15391 556 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 POLGP54098 1239 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-213ENST00000469300 SYCE1Q8N0S2 351 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
LIMS2-213ENST00000469300 SH3GLB2Q9NR46 395 aa16.64■□□□□ 0.25
LIMS2-213ENST00000469300 ECE2O60344 883 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 HSPA1LP34931 641 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 FAM47CQ5HY64 1035 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 PIGSQ96S52 555 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-213ENST00000469300 PPP1R9BQ96SB3 815 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 NAPGQ99747 312 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-213ENST00000469300 K7ENM7 598 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 STAT1P42224 750 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 KIF23Q02241 960 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-213ENST00000469300 PPP1R7Q15435 360 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 ZNF577Q9BSK1 485 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 MIS12Q9H081 205 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 SYT10Q6XYQ8 523 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 DYNLL2Q96FJ2 89 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 RSPH14Q9UHP6 348 aa16.63■□□□□ 0.25
LIMS2-213ENST00000469300 MROH7-TTC4A0A0A0MT08 1334 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 NR1I2O75469 434 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 RPN1P04843 607 aaKnown RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 KRT19P08727 400 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 ATF7P17544 494 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 APOBEC3FQ8IUX4 373 aaKnown RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 NACC1Q96RE7 527 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 GAS8O95995 478 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 TNNC2P02585 160 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 PRDX5P30044 214 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 NKX1-1Q15270 411 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 SYNE4Q8N205 404 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 SLC7A3Q8WY07 619 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 AP5M1Q9H0R1 490 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 TXNDC16Q9P2K2 825 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 FBXO40Q9UH90 709 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 PPM1FP49593 454 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 FOXO4P98177 505 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 SPATA1Q5VX52 437 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 DCUN1D2Q6PH85 259 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 ZNF34Q8IZ26 560 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 ZNF341Q9BYN7 854 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 AGTPBP1Q9UPW5 1226 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 CCND2P30279 289 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 YARSP54577 528 aaKnown RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 GBP6Q6ZN66 633 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 RSPH3Q86UC2 560 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 OR8K1Q8NGG5 319 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 LARP4BQ92615 738 aaKnown RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 SECISBP2LQ93073 1101 aaKnown RBP16.62■□□□□ 0.25
LIMS2-213ENST00000469300 CTTNBP2NLQ9P2B4 639 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
LIMS2-213ENST00000469300 XPOTO43592 962 aaKnown RBP16.61■□□□□ 0.25
LIMS2-213ENST00000469300 LPXNO60711 386 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 AP3B2Q13367 1082 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 ARFGAP2Q8N6H7 521 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-213ENST00000469300 UIMC1Q96RL1 719 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 FERP16591 822 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 MORC3Q14149 939 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 SEPT2Q15019 361 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 RCOR1Q9UKL0 485 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 SPATA31D1Q6ZQQ2 1576 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 SETD1BQ9UPS6 1966 aaKnown RBP16.61■□□□□ 0.25
LIMS2-213ENST00000469300 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 FDX1P10109 184 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
LIMS2-213ENST00000469300 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms