RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 ADGRE1Q14246 886 aa17.27■□□□□ 0.36
SNED1-209ENST00000469006 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
SNED1-209ENST00000469006 FAM160B2Q86V87 743 aa17.27■□□□□ 0.36
SNED1-209ENST00000469006 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.36
SNED1-209ENST00000469006 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
SNED1-209ENST00000469006 MTIF3Q9H2K0 278 aaKnown RBP17.27■□□□□ 0.36
SNED1-209ENST00000469006 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.36
SNED1-209ENST00000469006 GNEQ9Y223 722 aaKnown RBP17.27■□□□□ 0.36
SNED1-209ENST00000469006 DDX49Q9Y6V7 483 aaKnown RBP17.27■□□□□ 0.36
SNED1-209ENST00000469006 MYO9BQ13459 2157 aa17.27■□□□□ 0.36
SNED1-209ENST00000469006 BDP1A6H8Y1 2624 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 ASB14A6NK59 587 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 PDE4BQ07343 736 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 CHURC1Q8WUH1 139 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 ATXN2LQ8WWM7 1075 aaKnown RBP17.26■□□□□ 0.35
SNED1-209ENST00000469006 GMCL1Q96IK5 515 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 AP5M1Q9H0R1 490 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 YBX2Q9Y2T7 364 aaKnown RBP17.26■□□□□ 0.35
SNED1-209ENST00000469006 CHD7Q9P2D1 2997 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 GBF1Q92538 1859 aa17.26■□□□□ 0.35
SNED1-209ENST00000469006 GRIN2DO15399 1336 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 PATL2C9JE40 543 aaKnown RBP17.25■□□□□ 0.35
SNED1-209ENST00000469006 FGBP02675 491 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 ALAS1P13196 640 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 SMPD1P17405 629 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 IGFBP4P22692 258 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 SLC1A4P43007 532 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 CCL23P55773 120 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 TFAP4Q01664 338 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 CCDC85BQ15834 202 aaPredicted RBP17.25■□□□□ 0.35
SNED1-209ENST00000469006 TKFCQ3LXA3 575 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 OTOP2Q7RTS6 562 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
SNED1-209ENST00000469006 STAG1Q8WVM7 1258 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 NOC4LQ9BVI4 516 aaKnown RBP17.25■□□□□ 0.35
SNED1-209ENST00000469006 WNT8AQ9H1J5 351 aa17.25■□□□□ 0.35
SNED1-209ENST00000469006 NCOR1O75376 2440 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 DYNC1LI2O43237 492 aaPredicted RBP17.24■□□□□ 0.35
SNED1-209ENST00000469006 B4GALT4O60513 344 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 SLC3A2P08195 630 aaKnown RBP17.24■□□□□ 0.35
SNED1-209ENST00000469006 MCCP23508 829 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 SNAP25P60880 206 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 PSMC6P62333 389 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 PPARAQ07869 468 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 LRRFIP1Q32MZ4 808 aaKnown RBP17.24■□□□□ 0.35
SNED1-209ENST00000469006 KCTD1Q719H9 257 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 EEPD1Q7L9B9 569 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 RASGRP2Q7LDG7 609 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 ADAMTS19Q8TE59 1207 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 ASB2Q96Q27 587 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 SEC62Q99442 399 aaKnown RBP17.24■□□□□ 0.35
SNED1-209ENST00000469006 NAPBQ9H115 298 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 TRPV6Q9H1D0 765 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 SLC28A3Q9HAS3 691 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
SNED1-209ENST00000469006 ZEB2O60315 1214 aa17.23■□□□□ 0.35
SNED1-209ENST00000469006 COL9A1P20849 921 aa17.23■□□□□ 0.35
SNED1-209ENST00000469006 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
SNED1-209ENST00000469006 TAPT1Q6NXT6 567 aa17.23■□□□□ 0.35
SNED1-209ENST00000469006 SEZ6LQ9BYH1 1024 aa17.23■□□□□ 0.35
SNED1-209ENST00000469006 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
SNED1-209ENST00000469006 LCTP09848 1927 aa17.23■□□□□ 0.35
SNED1-209ENST00000469006 PLA2G6O60733 806 aa17.22■□□□□ 0.35
SNED1-209ENST00000469006 RABGGTBP53611 331 aa17.22■□□□□ 0.35
SNED1-209ENST00000469006 MRPS5P82675 430 aaKnown RBP17.22■□□□□ 0.35
SNED1-209ENST00000469006 TMEM63BQ5T3F8 832 aa17.22■□□□□ 0.35
SNED1-209ENST00000469006 DCTPP1Q9H773 170 aa17.22■□□□□ 0.35
SNED1-209ENST00000469006 CYP39A1Q9NYL5 469 aa17.22■□□□□ 0.35
SNED1-209ENST00000469006 CCPG1Q9ULG6 757 aa17.22■□□□□ 0.35
SNED1-209ENST00000469006 PRR12Q9ULL5 1215 aa17.22■□□□□ 0.35
SNED1-209ENST00000469006 PPP4R3BQ5MIZ7 849 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 IQSEC1Q6DN90 963 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 NSMFQ6X4W1 530 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 IL27Q8NEV9 243 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 SCLYQ96I15 445 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 PURBQ96QR8 312 aaKnown RBP17.21■□□□□ 0.35
SNED1-209ENST00000469006 UHRF1Q96T88 793 aaPredicted RBP17.21■□□□□ 0.35
SNED1-209ENST00000469006 FSD1Q9BTV5 496 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNED1-209ENST00000469006 Q9Y3F1 56 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 SLC4A7Q9Y6M7 1214 aa17.21■□□□□ 0.35
SNED1-209ENST00000469006 TSPY2A6NKD2 308 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 ZBBXA8MT70 800 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 NMT2O60551 498 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 ZMYM1Q5SVZ6 1142 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 RCSD1Q6JBY9 416 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 KIAA1211Q6ZU35 1233 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 RPUSD2Q8IZ73 545 aaKnown RBP17.2■□□□□ 0.34
SNED1-209ENST00000469006 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 VWCEQ96DN2 955 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
SNED1-209ENST00000469006 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
SNED1-209ENST00000469006 MYOGP15173 224 aa17.19■□□□□ 0.34
SNED1-209ENST00000469006 CTDSPL2Q05D32 466 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms