RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SASS6Q6UVJ0 657 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 WDR18Q9BV38 432 aa21.59■■□□□ 1.05
SMC4-209ENST00000468653 DOCK1Q14185 1865 aa21.58■■□□□ 1.05
SMC4-209ENST00000468653 SSC5DA1L4H1 1573 aa21.58■■□□□ 1.05
SMC4-209ENST00000468653 ADM5C9JUS6 153 aa21.58■■□□□ 1.04
SMC4-209ENST00000468653 KRT26Q7Z3Y9 468 aa21.58■■□□□ 1.04
SMC4-209ENST00000468653 C4orf32Q8N8J7 132 aa21.58■■□□□ 1.04
SMC4-209ENST00000468653 TIGD1Q96MW7 591 aa21.58■■□□□ 1.04
SMC4-209ENST00000468653 TYRO3Q06418 890 aa21.57■■□□□ 1.04
SMC4-209ENST00000468653 CCDC174Q6PII3 467 aa21.57■■□□□ 1.04
SMC4-209ENST00000468653 ZNF280CQ8ND82 737 aa21.57■■□□□ 1.04
SMC4-209ENST00000468653 RANBP17Q9H2T7 1088 aaKnown RBP21.57■■□□□ 1.04
SMC4-209ENST00000468653 FBXO28Q9NVF7 368 aa21.57■■□□□ 1.04
SMC4-209ENST00000468653 USP17L15C9J2P7 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L13C9JLJ4 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L11C9JVI0 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L18D6R9N7 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L22D6RA61 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L17D6RBQ6 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L19D6RCP7 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L20D6RJB6 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 LAD1O00515 517 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP2O75604 605 aaPredicted RBP21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L24Q0WX57 530 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 USP17L6PQ6QN14 398 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 RNF214Q8ND24 703 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 ZHX2Q9Y6X8 837 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.56■■□□□ 1.04
SMC4-209ENST00000468653 BACE1P56817 501 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 ORC2Q13416 577 aaPredicted RBP21.56■■□□□ 1.04
SMC4-209ENST00000468653 NOL9Q5SY16 702 aaKnown RBP21.56■■□□□ 1.04
SMC4-209ENST00000468653 MCTP2Q6DN12 878 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 DLK2Q6UY11 383 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 ZC3H15Q8WU90 426 aaKnown RBP21.56■■□□□ 1.04
SMC4-209ENST00000468653 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 EMILIN3Q9NT22 766 aa21.56■■□□□ 1.04
SMC4-209ENST00000468653 PPP1R12BO60237 982 aaPredicted RBP21.55■■□□□ 1.04
SMC4-209ENST00000468653 NEMFO60524 1076 aa21.55■■□□□ 1.04
SMC4-209ENST00000468653 DTHD1Q6ZMT9 781 aa21.55■■□□□ 1.04
SMC4-209ENST00000468653 USP49Q70CQ1 688 aa21.55■■□□□ 1.04
SMC4-209ENST00000468653 PRPF38AQ8NAV1 312 aaKnown RBP21.55■■□□□ 1.04
SMC4-209ENST00000468653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.55■■□□□ 1.04
SMC4-209ENST00000468653 SLF1Q9BQI6 1058 aa21.55■■□□□ 1.04
SMC4-209ENST00000468653 TMEM60Q9H2L4 133 aa21.55■■□□□ 1.04
SMC4-209ENST00000468653 IQCA1LA6NCM1 817 aa21.54■■□□□ 1.04
SMC4-209ENST00000468653 POLR2DO15514 142 aaKnown RBP21.54■■□□□ 1.04
SMC4-209ENST00000468653 VCAM1P19320 739 aa21.54■■□□□ 1.04
SMC4-209ENST00000468653 DGKZQ13574 1117 aa21.54■■□□□ 1.04
SMC4-209ENST00000468653 CNNM3Q8NE01 707 aa21.54■■□□□ 1.04
SMC4-209ENST00000468653 SYMPKQ92797 1274 aaKnown RBP21.54■■□□□ 1.04
SMC4-209ENST00000468653 EPSTI1Q96J88 318 aa21.54■■□□□ 1.04
SMC4-209ENST00000468653 PANK2Q9BZ23 570 aa21.54■■□□□ 1.04
SMC4-209ENST00000468653 MEIS2O14770 477 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 TAL1P17542 331 aaPredicted RBP21.53■■□□□ 1.04
SMC4-209ENST00000468653 LONP1P36776 959 aaKnown RBP21.53■■□□□ 1.04
SMC4-209ENST00000468653 PRPHP41219 470 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 MAP3K9P80192 1104 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 AP3B2Q13367 1082 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 IL17AQ16552 155 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 LONRF3Q496Y0 759 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 EAPPQ56P03 285 aaPredicted RBP21.53■■□□□ 1.04
SMC4-209ENST00000468653 KRBA2Q6ZNG9 492 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 SRCAPQ6ZRS2 3230 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 C19orf81C9J6K1 198 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 OR52Z1P0C646 297 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 NF2P35240 595 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 PDILTQ8N807 584 aa21.53■■□□□ 1.04
SMC4-209ENST00000468653 RPAP3Q9H6T3 665 aaPredicted RBP21.53■■□□□ 1.04
SMC4-209ENST00000468653 FLOT1O75955 427 aa21.52■■□□□ 1.04
SMC4-209ENST00000468653 ERCC4Q92889 916 aaPredicted RBP21.52■■□□□ 1.04
SMC4-209ENST00000468653 ANO3Q9BYT9 981 aa21.52■■□□□ 1.04
SMC4-209ENST00000468653 TAF1DQ9H5J8 278 aaPredicted RBP21.52■■□□□ 1.04
SMC4-209ENST00000468653 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.04
SMC4-209ENST00000468653 KIAA1468Q9P260 1216 aa21.52■■□□□ 1.04
SMC4-209ENST00000468653 HOOK1Q9UJC3 728 aaKnown RBP21.52■■□□□ 1.04
SMC4-209ENST00000468653 MRPL11Q9Y3B7 192 aaKnown RBP21.52■■□□□ 1.04
SMC4-209ENST00000468653 FOSP01100 380 aaPredicted RBP21.51■■□□□ 1.03
SMC4-209ENST00000468653 ZRSR1Q15695 479 aaKnown RBP21.51■■□□□ 1.03
SMC4-209ENST00000468653 NAP1L4Q99733 375 aaKnown RBP21.51■■□□□ 1.03
SMC4-209ENST00000468653 CSADQ9Y600 493 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 SPDYE3A6NKU9 549 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 TDP2O95551 362 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 IREB2P48200 963 aaKnown RBP21.51■■□□□ 1.03
SMC4-209ENST00000468653 HMGCS2P54868 508 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 VGLL4Q14135 290 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 LDHDQ86WU2 507 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 ANP32BQ92688 251 aaKnown RBP21.51■■□□□ 1.03
SMC4-209ENST00000468653 CDCA5Q96FF9 252 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 SERTAD1Q9UHV2 236 aa21.51■■□□□ 1.03
SMC4-209ENST00000468653 CTDP1Q9Y5B0 961 aaPredicted RBP21.51■■□□□ 1.03
SMC4-209ENST00000468653 ABCB11O95342 1321 aa21.5■■□□□ 1.03
SMC4-209ENST00000468653 OPLAHO14841 1288 aa21.5■■□□□ 1.03
SMC4-209ENST00000468653 GCFC2P16383 781 aaKnown RBP21.5■■□□□ 1.03
SMC4-209ENST00000468653 TXLNAP40222 546 aa21.5■■□□□ 1.03
SMC4-209ENST00000468653 CALCRLQ16602 461 aa21.5■■□□□ 1.03
SMC4-209ENST00000468653 STX1AQ16623 288 aa21.5■■□□□ 1.03
SMC4-209ENST00000468653 ANO6Q4KMQ2 910 aa21.5■■□□□ 1.03
SMC4-209ENST00000468653 PPP4R3AQ6IN85 833 aa21.5■■□□□ 1.03
SMC4-209ENST00000468653 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.5■■□□□ 1.03
SMC4-209ENST00000468653 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms