RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 MMP16P51512 607 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 OAZ1P54368 228 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 EVCP57679 992 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 HAND2P61296 217 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 IRX3P78415 501 aaPredicted RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 KLRC3Q07444 240 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 FUT2Q10981 343 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 FOXC1Q12948 553 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 NFX1Q12986 1120 aaKnown RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 CRHR2Q13324 411 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 COG2Q14746 738 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 ARHGEF6Q15052 776 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 SEC23AQ15436 765 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 TAF1CQ15572 869 aaPredicted RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 SLC4A8Q2Y0W8 1093 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 C17orf99Q6UX52 265 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 BTNL9Q6UXG8 535 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 CATSPERGQ6ZRH7 1159 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 DHX32Q7L7V1 743 aaKnown RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 FAM160B2Q86V87 743 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 SGMS1Q86VZ5 419 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 FAM43AQ8N2R8 423 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 ENAHQ8N8S7 591 aaPredicted RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 ACER1Q8TDN7 264 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 SMCR8Q8TEV9 937 aaPredicted RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 DCAF4Q8WV16 495 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 ZIC5Q96T25 663 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 USP26Q9BXU7 913 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 AGXT2Q9BYV1 514 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 ASCC2Q9H1I8 757 aaPredicted RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 TOMM22Q9NS69 142 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 GMPR2Q9P2T1 348 aaKnown RBP4.13□□□□□ -1.75
TRIM59-202ENST00000468542 MORF4L1Q9UBU8 362 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 FEM1BQ9UK73 627 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 STX8Q9UNK0 236 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 RABGAP1Q9Y3P9 1069 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 TACC3Q9Y6A5 838 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 DNAH12Q6ZR08 3092 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 FRMPD3Q5JV73 1810 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 TNKSO95271 1327 aa4.13□□□□□ -1.75
TRIM59-202ENST00000468542 ZSWIM8A7E2V4 1837 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 B4E1Z4 1266 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 GPR25O00155 361 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 WNT7AO00755 349 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 WIPF1O43516 503 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 TRPA1O75762 1119 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 DDAH1O94760 285 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 HSPA1AP0DMV8 641 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 HSPA1BP0DMV9 641 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 PDHBP11177 359 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 BMP3P12645 472 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 RBM25P49756 843 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 STAT2P52630 851 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 PRMT2P55345 433 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 HERVK_113P62684 666 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 CCNA1P78396 465 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 LACTBP83111 547 aaPredicted RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 EXOSC10Q01780 885 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 ZNF543Q08ER8 600 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 TROAPQ12815 778 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 TRAF1Q13077 416 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 GRM1Q13255 1194 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 PKN2Q16513 984 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 SHROOM1Q2M3G4 852 aaPredicted RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 C8orf34Q49A92 452 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 ASPRV1Q53RT3 343 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 FAM47AQ5JRC9 791 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 RRP12Q5JTH9 1297 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 TREML2Q5T2D2 321 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 IFIT1BQ5T764 474 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 STOX1Q6ZVD7 989 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 ABRAQ8N0Z2 381 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 PRPF38AQ8NAV1 312 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 PNMA1Q8ND90 353 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 SHCBP1Q8NEM2 672 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 IGDCC4Q8TDY8 1250 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 CHURC1Q8WUH1 139 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 ERO1AQ96HE7 468 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 NEK1Q96PY6 1258 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 SLF1Q9BQI6 1058 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 TMEM47Q9BQJ4 181 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 ALDH8A1Q9H2A2 487 aaPredicted RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 RPAP3Q9H6T3 665 aaPredicted RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 KAT14Q9H8E8 782 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 UPF2Q9HAU5 1272 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 CLIP2Q9UDT6 1046 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 PPP1R9AQ9ULJ8 1098 aa4.12□□□□□ -1.75
TRIM59-202ENST00000468542 FCF1Q9Y324 198 aaKnown RBP4.12□□□□□ -1.75
TRIM59-202ENST00000468542 KIAA0100Q14667 2235 aaKnown RBP4.11□□□□□ -1.75
TRIM59-202ENST00000468542 CCDC196A0A1B0GTZ2 297 aa4.11□□□□□ -1.75
TRIM59-202ENST00000468542 VWA5AO00534 786 aa4.11□□□□□ -1.75
TRIM59-202ENST00000468542 SH2B2O14492 632 aaPredicted RBP4.11□□□□□ -1.75
TRIM59-202ENST00000468542 IFIT3O14879 490 aaKnown RBP4.11□□□□□ -1.75
TRIM59-202ENST00000468542 AXIN1O15169 862 aa4.11□□□□□ -1.75
TRIM59-202ENST00000468542 FOXN1O15353 648 aa4.11□□□□□ -1.75
TRIM59-202ENST00000468542 PRC1O43663 620 aa4.11□□□□□ -1.75
TRIM59-202ENST00000468542 STRNO43815 780 aa4.11□□□□□ -1.75
TRIM59-202ENST00000468542 NMT2O60551 498 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms