RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 NBR1Q14596 966 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 JAKMIP3Q5VZ66 844 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 PIK3AP1Q6ZUJ8 805 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
MSX1-202ENST00000468421 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 CUL5Q93034 780 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 PGBD1Q96JS3 809 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 ZNF396Q96N95 335 aaPredicted RBP12.32□□□□□ -0.44
MSX1-202ENST00000468421 BIN2Q9UBW5 565 aaPredicted RBP12.32□□□□□ -0.44
MSX1-202ENST00000468421 CCPG1Q9ULG6 757 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
MSX1-202ENST00000468421 ZBED4O75132 1171 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 ZBTB48P10074 688 aaPredicted RBP12.31□□□□□ -0.44
MSX1-202ENST00000468421 FDX1P10109 184 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 GTF2A2P52657 109 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 TMEM132BQ14DG7 1078 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 USP17L6PQ6QN14 398 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 SAPCD2Q86UD0 394 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 REXO1Q8N1G1 1221 aaKnown RBP12.31□□□□□ -0.44
MSX1-202ENST00000468421 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 LEO1Q8WVC0 666 aaPredicted RBP12.31□□□□□ -0.44
MSX1-202ENST00000468421 BRI3BPQ8WY22 251 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 P2RX7Q99572 595 aaKnown RBP12.31□□□□□ -0.44
MSX1-202ENST00000468421 ASCC2Q9H1I8 757 aaPredicted RBP12.31□□□□□ -0.44
MSX1-202ENST00000468421 PSTPIP2Q9H939 334 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
MSX1-202ENST00000468421 TLL2Q9Y6L7 1015 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 ABCB11O95342 1321 aa12.31□□□□□ -0.44
MSX1-202ENST00000468421 CCL15-CCL14A0A0B4J2E2 113 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 CCDC194A0A1B0GVG4 234 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 MEIS2O14770 477 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 PEX10O60683 326 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 CETPP11597 493 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 ATP2B1P20020 1258 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
MSX1-202ENST00000468421 IRX3P78415 501 aaPredicted RBP12.3□□□□□ -0.44
MSX1-202ENST00000468421 CCL15Q16663 113 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 MUM1L1Q5H9M0 696 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 ANO1Q5XXA6 986 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 ATL3Q6DD88 541 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 KRT25Q7Z3Z0 450 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 BICD2Q8TD16 824 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 RTEL1Q9NZ71 1219 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
MSX1-202ENST00000468421 RIPK3Q9Y572 518 aa12.3□□□□□ -0.44
MSX1-202ENST00000468421 CTDP1Q9Y5B0 961 aaPredicted RBP12.3□□□□□ -0.44
MSX1-202ENST00000468421 BTBD19C9JJ37 291 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 GOLGA6L22H0YM25 854 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 NFIBO00712 420 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 EDIL3O43854 480 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 GADD45BO75293 160 aaPredicted RBP12.29□□□□□ -0.44
MSX1-202ENST00000468421 PRPF40AO75400 957 aaKnown RBP12.29□□□□□ -0.44
MSX1-202ENST00000468421 CNMDO75829 334 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 ALAS1P13196 640 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 ZNF157P51786 506 aaPredicted RBP12.29□□□□□ -0.44
MSX1-202ENST00000468421 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
MSX1-202ENST00000468421 HERVK_113P62684 666 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 TRAF1Q13077 416 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 NONOQ15233 471 aaKnown RBP eCLIP12.29□□□□□ -0.44
MSX1-202ENST00000468421 PTPAQ15257 358 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
MSX1-202ENST00000468421 INF2Q27J81 1249 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 RILPL1Q5EBL4 403 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 SNRNP48Q6IEG0 339 aaKnown RBP12.29□□□□□ -0.44
MSX1-202ENST00000468421 RGMBQ6NW40 437 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 LBX2Q6XYB7 198 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 CLEC4DQ8WXI8 215 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 SPATA32Q96LK8 384 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 ANO3Q9BYT9 981 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 GLT8D2Q9H1C3 349 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 HOXC10Q9NYD6 342 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 BTBD7Q9P203 1132 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 CFAP45Q9UL16 551 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
MSX1-202ENST00000468421 TMEM88BA6NKF7 163 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 ATP2A1O14983 1001 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 YEATS4O95619 227 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 CFBP00751 764 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 SLC10A3P09131 477 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 OSBPP22059 807 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 HOXA13P31271 388 aaPredicted RBP12.28□□□□□ -0.44
MSX1-202ENST00000468421 OAZ1P54368 228 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 PABPC4Q13310 644 aaKnown RBP eCLIP12.28□□□□□ -0.44
MSX1-202ENST00000468421 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 ANKRD23Q86SG2 305 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 LINC00301Q8NCQ3 95 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 TBCKQ8TEA7 893 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 SCAND2PQ9GZW5 306 aaPredicted RBP12.28□□□□□ -0.44
MSX1-202ENST00000468421 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
MSX1-202ENST00000468421 HOMER2Q9NSB8 354 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 RCOR1Q9UKL0 485 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 NOL7Q9UMY1 257 aaKnown RBP12.28□□□□□ -0.44
MSX1-202ENST00000468421 ELP1O95163 1332 aa12.28□□□□□ -0.44
MSX1-202ENST00000468421 PLXNB2O15031 1838 aa12.27□□□□□ -0.44
MSX1-202ENST00000468421 ZNFX1Q9P2E3 1918 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms