RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 DCAF15Q66K64 600 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 CRYGNQ8WXF5 182 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 TRAPPC10P48553 1259 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 STAT2P52630 851 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 MTMR2Q13614 643 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 TTC38Q5R3I4 469 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 DPY19L2Q6NUT2 758 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 USP49Q70CQ1 688 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-208ENST00000468300 AFG3L2Q9Y4W6 797 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 SRPRBQ9Y5M8 271 aaKnown RBP9.44□□□□□ -0.9
BRCA1-208ENST00000468300 UBE2SQ16763 222 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 INF2Q27J81 1249 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 POTEEQ6S8J3 1075 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 ZC3H15Q8WU90 426 aaKnown RBP9.43□□□□□ -0.9
BRCA1-208ENST00000468300 CLSTN2Q9H4D0 955 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 BRMS1Q9HCU9 246 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 TRIM75PA6NK02 468 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 PFKFB1P16118 471 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 FAM160A1Q05DH4 1040 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 LRSAM1Q6UWE0 723 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 FSIP1Q8NA03 581 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 MRPS27Q92552 414 aaKnown RBP9.43□□□□□ -0.9
BRCA1-208ENST00000468300 TMEM60Q9H2L4 133 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 C6orf50Q9HD87 102 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 PCDHA1Q9Y5I3 950 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 A0A087X0B3 334 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 CUTAO60888 179 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 VCAM1P19320 739 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 ATP2B1P20020 1258 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 GNA11P29992 359 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 ADCY7P51828 1080 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 BACE1P56817 501 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 PTGDRQ13258 359 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 VGLL4Q14135 290 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 SPECC1Q5M775 1068 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 TMCO4Q5TGY1 634 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
BRCA1-208ENST00000468300 BICD2Q8TD16 824 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 CCDC12Q8WUD4 166 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-208ENST00000468300 WNK4Q96J92 1243 aa9.43□□□□□ -0.9
BRCA1-208ENST00000468300 SPP2Q13103 211 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 CAMK4Q16566 473 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 MOB2Q70IA6 237 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 KRI1Q8N9T8 703 aaKnown RBP9.42□□□□□ -0.9
BRCA1-208ENST00000468300 DCPSQ96C86 337 aaKnown RBP9.42□□□□□ -0.9
BRCA1-208ENST00000468300 CDCA5Q96FF9 252 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 C12orf42Q96LP6 360 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 CSRNP2Q9H175 543 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 FEM1BQ9UK73 627 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 LOC102724159A0A0B4J2E5 919 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L15C9J2P7 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L13C9JLJ4 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L11C9JVI0 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L18D6R9N7 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L22D6RA61 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L17D6RBQ6 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L19D6RCP7 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L20D6RJB6 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 WDR46O15213 610 aaKnown RBP9.42□□□□□ -0.9
BRCA1-208ENST00000468300 FMR1Q06787 632 aaKnown RBP eCLIP9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L24Q0WX57 530 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 PRKG1Q13976 671 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 PWP2Q15269 919 aaKnown RBP9.42□□□□□ -0.9
BRCA1-208ENST00000468300 SUPT20HL1Q3ZLR7 823 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 USP17L6PQ6QN14 398 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 REXO1Q8N1G1 1221 aaKnown RBP9.42□□□□□ -0.9
BRCA1-208ENST00000468300 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 TBCKQ8TEA7 893 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 LPAR1Q92633 364 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 HOOK2Q96ED9 719 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 SH2D4AQ9H788 454 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 LCTP09848 1927 aa9.42□□□□□ -0.9
BRCA1-208ENST00000468300 MCM7P33993 719 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 MAP3K11Q16584 847 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 KRT25Q7Z3Z0 450 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 TBC1D5Q92609 795 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 AMNQ9BXJ7 453 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 PSTPIP2Q9H939 334 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 ADAMTS5Q9UNA0 930 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 ZHX2Q9Y6X8 837 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 SOCS7O14512 581 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 MDM2Q00987 491 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-208ENST00000468300 USH1GQ495M9 461 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 FBXO11Q86XK2 927 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 REPS2Q8NFH8 660 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 DDX19AQ9NUU7 478 aaKnown RBP9.41□□□□□ -0.9
BRCA1-208ENST00000468300 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 SLC37A4O43826 429 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 ZNF202O95125 648 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
BRCA1-208ENST00000468300 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 FAM160B2Q86V87 743 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 SULF1Q8IWU6 871 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 CUL5Q93034 780 aa9.41□□□□□ -0.9
BRCA1-208ENST00000468300 EPSTI1Q96J88 318 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms