RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 HOMER2Q9NSB8 354 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 NYAP2Q9P242 653 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 MSRAQ9UJ68 235 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 PRDM1O75626 825 aa16.22■□□□□ 0.19
RPP40-204ENST00000468105 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
RPP40-204ENST00000468105 SNAP25P60880 206 aa16.22■□□□□ 0.19
RPP40-204ENST00000468105 HDAC1Q13547 482 aaPredicted RBP16.22■□□□□ 0.19
RPP40-204ENST00000468105 ITGA7Q13683 1181 aa16.22■□□□□ 0.19
RPP40-204ENST00000468105 TTLL4Q14679 1199 aa16.22■□□□□ 0.19
RPP40-204ENST00000468105 RAB30Q15771 203 aa16.22■□□□□ 0.19
RPP40-204ENST00000468105 LRRC47Q8N1G4 583 aaKnown RBP16.22■□□□□ 0.19
RPP40-204ENST00000468105 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
RPP40-204ENST00000468105 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
RPP40-204ENST00000468105 C11orf16Q9NQ32 467 aa16.22■□□□□ 0.19
RPP40-204ENST00000468105 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
RPP40-204ENST00000468105 TNFAIP2Q03169 654 aa16.21■□□□□ 0.19
RPP40-204ENST00000468105 TAPT1Q6NXT6 567 aa16.21■□□□□ 0.19
RPP40-204ENST00000468105 KIF1BPQ96EK5 621 aa16.21■□□□□ 0.19
RPP40-204ENST00000468105 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
RPP40-204ENST00000468105 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
RPP40-204ENST00000468105 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
RPP40-204ENST00000468105 MTCH2Q9Y6C9 303 aa16.21■□□□□ 0.19
RPP40-204ENST00000468105 SBK1Q52WX2 424 aa16.2■□□□□ 0.18
RPP40-204ENST00000468105 EEPD1Q7L9B9 569 aa16.2■□□□□ 0.18
RPP40-204ENST00000468105 OSBP2Q969R2 916 aa16.2■□□□□ 0.18
RPP40-204ENST00000468105 MKL1Q969V6 931 aa16.2■□□□□ 0.18
RPP40-204ENST00000468105 FAM122AQ96E09 287 aa16.2■□□□□ 0.18
RPP40-204ENST00000468105 LRFN3Q9BTN0 628 aa16.2■□□□□ 0.18
RPP40-204ENST00000468105 RWDD1Q9H446 243 aaPredicted RBP16.2■□□□□ 0.18
RPP40-204ENST00000468105 TRMT13Q9NUP7 481 aaKnown RBP16.2■□□□□ 0.18
RPP40-204ENST00000468105 PTPRSQ13332 1948 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 TET1Q8NFU7 2136 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 MINDY4BA8MYZ0 360 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
RPP40-204ENST00000468105 DYNC1LI2O43237 492 aaPredicted RBP16.19■□□□□ 0.18
RPP40-204ENST00000468105 SMARCA5O60264 1052 aaPredicted RBP16.19■□□□□ 0.18
RPP40-204ENST00000468105 ZBED4O75132 1171 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 HMMRO75330 724 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 CYP2C9P11712 490 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 FSCN1Q16658 493 aaKnown RBP16.19■□□□□ 0.18
RPP40-204ENST00000468105 MUM1L1Q5H9M0 696 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 PPP2R2DQ66LE6 453 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 TLK2Q86UE8 772 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 FBXO16Q8IX29 292 aaPredicted RBP16.19■□□□□ 0.18
RPP40-204ENST00000468105 CHST13Q8NET6 341 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 CD320Q9NPF0 282 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 MTMR4Q9NYA4 1195 aa16.19■□□□□ 0.18
RPP40-204ENST00000468105 BRWD1Q9NSI6 2320 aa16.18■□□□□ 0.18
RPP40-204ENST00000468105 TLL1O43897 1013 aa16.18■□□□□ 0.18
RPP40-204ENST00000468105 CA3P07451 260 aa16.18■□□□□ 0.18
RPP40-204ENST00000468105 CCDC174Q6PII3 467 aa16.18■□□□□ 0.18
RPP40-204ENST00000468105 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
RPP40-204ENST00000468105 ARPP21Q9UBL0 812 aaPredicted RBP16.18■□□□□ 0.18
RPP40-204ENST00000468105 PCDHA11Q9Y5I1 949 aa16.18■□□□□ 0.18
RPP40-204ENST00000468105 SLC4A7Q9Y6M7 1214 aa16.18■□□□□ 0.18
RPP40-204ENST00000468105 ERC2O15083 957 aa16.17■□□□□ 0.18
RPP40-204ENST00000468105 POU3F3P20264 500 aaPredicted RBP16.17■□□□□ 0.18
RPP40-204ENST00000468105 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
RPP40-204ENST00000468105 ALDH8A1Q9H2A2 487 aaPredicted RBP16.17■□□□□ 0.18
RPP40-204ENST00000468105 RNF146Q9NTX7 359 aa16.17■□□□□ 0.18
RPP40-204ENST00000468105 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
RPP40-204ENST00000468105 M0R2C6 588 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 LPXNO60711 386 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 ATP2A2P16615 1042 aaKnown RBP16.16■□□□□ 0.18
RPP40-204ENST00000468105 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 SLFN13Q68D06 897 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
RPP40-204ENST00000468105 TMCO2Q7Z6W1 182 aaPredicted RBP16.16■□□□□ 0.18
RPP40-204ENST00000468105 DEFB128Q7Z7B8 93 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 GMCL1P1Q8NEA9 526 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 MKNK2Q9HBH9 465 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
RPP40-204ENST00000468105 FAM86C2PA6NEL3 165 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 ZBBXA8MT70 800 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 IGHDP01880 384 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 BMP3P12645 472 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 OAZ1P54368 228 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 TAP1Q03518 808 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 GPNMBQ14956 572 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 CENPQQ7L2Z9 268 aaPredicted RBP16.15■□□□□ 0.18
RPP40-204ENST00000468105 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
RPP40-204ENST00000468105 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
RPP40-204ENST00000468105 TCTN1Q2MV58 587 aa16.14■□□□□ 0.17
RPP40-204ENST00000468105 TRERF1Q96PN7 1200 aa16.14■□□□□ 0.17
RPP40-204ENST00000468105 SEC62Q99442 399 aaKnown RBP16.14■□□□□ 0.17
RPP40-204ENST00000468105 CYP39A1Q9NYL5 469 aa16.14■□□□□ 0.17
RPP40-204ENST00000468105 COL4A4P53420 1690 aaPredicted RBP16.14■□□□□ 0.17
RPP40-204ENST00000468105 LCHNA4D1U4 455 aa16.13■□□□□ 0.17
RPP40-204ENST00000468105 FOXP2O15409 715 aa16.13■□□□□ 0.17
RPP40-204ENST00000468105 NMT2O60551 498 aa16.13■□□□□ 0.17
RPP40-204ENST00000468105 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
RPP40-204ENST00000468105 CABYRO75952 493 aa16.13■□□□□ 0.17
RPP40-204ENST00000468105 ALAS1P13196 640 aa16.13■□□□□ 0.17
RPP40-204ENST00000468105 MCCP23508 829 aa16.13■□□□□ 0.17
RPP40-204ENST00000468105 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms