RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 XBP1P17861 261 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 ERCC3P19447 782 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 PKN1Q16512 942 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 WWC2Q6AWC2 1192 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 PPP1R18Q6NYC8 613 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 FAM177A1Q8N128 213 aaPredicted RBP17.54■□□□□ 0.4
SNIP1-202ENST00000468040 FAM184AQ8NB25 1140 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
SNIP1-202ENST00000468040 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 ACAD9Q9H845 621 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 CWC22Q9HCG8 908 aaKnown RBP17.54■□□□□ 0.4
SNIP1-202ENST00000468040 HOMER2Q9NSB8 354 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 RNF146Q9NTX7 359 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 SMC3Q9UQE7 1217 aa17.54■□□□□ 0.4
SNIP1-202ENST00000468040 FDPSP14324 419 aaKnown RBP17.53■□□□□ 0.4
SNIP1-202ENST00000468040 KCNA4P22459 653 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
SNIP1-202ENST00000468040 KIF22Q14807 665 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 MCF2L2Q86YR7 1114 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.4
SNIP1-202ENST00000468040 COA7Q96BR5 231 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 MAF1Q9H063 256 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 PORCNQ9H237 461 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 EFCC1Q9HA90 598 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 SH3GLB2Q9NR46 395 aa17.53■□□□□ 0.4
SNIP1-202ENST00000468040 STXBP3O00186 592 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 NAPAP54920 295 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 FCGRTP55899 365 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 WDR78Q5VTH9 848 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNIP1-202ENST00000468040 TEX2Q8IWB9 1127 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 CCDC148Q8NFR7 591 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 ALG1Q9BT22 464 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 IVNS1ABPQ9Y6Y0 642 aa17.52■□□□□ 0.4
SNIP1-202ENST00000468040 STRNO43815 780 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 FKTNO75072 461 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 TAL1P17542 331 aaPredicted RBP17.51■□□□□ 0.39
SNIP1-202ENST00000468040 MUM1L1Q5H9M0 696 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 GPR142Q7Z601 462 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 PLEKHH3Q7Z736 793 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 ABRAQ8N0Z2 381 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 SAMD3Q8N6K7 520 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 RGS22Q8NE09 1264 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 ERO1AQ96HE7 468 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 TSKSQ9UJT2 592 aa17.51■□□□□ 0.39
SNIP1-202ENST00000468040 PFASO15067 1338 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 ESYT2A0FGR8 921 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 NFIBO00712 420 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 TNPO2O14787 897 aaKnown RBP17.5■□□□□ 0.39
SNIP1-202ENST00000468040 DTNBO60941 627 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 HSPA1AP0DMV8 641 aaKnown RBP17.5■□□□□ 0.39
SNIP1-202ENST00000468040 HSPA1BP0DMV9 641 aaKnown RBP17.5■□□□□ 0.39
SNIP1-202ENST00000468040 FCER1AP12319 257 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 GJB2P29033 226 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 TRIM29Q14134 588 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 KCTD2Q14681 263 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 ARHGEF6Q15052 776 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 ZNF296Q8WUU4 475 aaPredicted RBP17.5■□□□□ 0.39
SNIP1-202ENST00000468040 AIFM3Q96NN9 605 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 MMP19Q99542 508 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
SNIP1-202ENST00000468040 VPS54Q9P1Q0 977 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 RBM19Q9Y4C8 960 aaKnown RBP17.5■□□□□ 0.39
SNIP1-202ENST00000468040 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
SNIP1-202ENST00000468040 RBBP6Q7Z6E9 1792 aaKnown RBP17.49■□□□□ 0.39
SNIP1-202ENST00000468040 GNA11P29992 359 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 PSMC4P43686 418 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 ADCY7P51828 1080 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 MRPL12P52815 198 aaKnown RBP17.49■□□□□ 0.39
SNIP1-202ENST00000468040 GALNT17Q6IS24 598 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 TYW1BQ6NUM6 668 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 SOCS4Q8WXH5 440 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 CUL5Q93034 780 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 PSTPIP2Q9H939 334 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 C6orf50Q9HD87 102 aa17.49■□□□□ 0.39
SNIP1-202ENST00000468040 SMCO2A6NFE2 343 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 GCOM1H8Y6P7 765 aaPredicted RBP17.48■□□□□ 0.39
SNIP1-202ENST00000468040 OPLAHO14841 1288 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 GNRH1P01148 92 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 POLR2MP0CAP2 368 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 PTPREP23469 700 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 CALML3P27482 149 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 CTCFP49711 727 aaPredicted RBP17.48■□□□□ 0.39
SNIP1-202ENST00000468040 NLRP5P59047 1200 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 GHRHRQ02643 423 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 GRB14Q14449 540 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 NSMFQ6X4W1 530 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 RNF207Q6ZRF8 634 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 C8orf76Q96K31 380 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
SNIP1-202ENST00000468040 A1CFQ9NQ94 594 aaKnown RBP17.48■□□□□ 0.39
SNIP1-202ENST00000468040 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 PIK3CDO00329 1044 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms