RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CD2BP2	O95400	341 aa	Known RBP	14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	ZNF865	P0CJ78	1059 aa	Predicted RBP	14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	SLC4A3	P48751	1232 aa		14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	FXR1	P51114	621 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	IK	Q13123	557 aa	Predicted RBP	14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	LRRC26	Q2I0M4	334 aa		14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	TKFC	Q3LXA3	575 aa		14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	BTNL9	Q6UXG8	535 aa		14.02	□□□□□ -0.17
CTNS-205	ENST00000467663		Q6ZUG5	572 aa		14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	SENP6	Q9GZR1	1112 aa	Predicted RBP	14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	PRR12	Q9ULL5	1215 aa		14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	ISY1	Q9ULR0	285 aa	Known RBP	14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	CIZ1	Q9ULV3	898 aa	Predicted RBP	14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	TAF6L	Q9Y6J9	622 aa		14.02	□□□□□ -0.17
CTNS-205	ENST00000467663	FRMPD3	Q5JV73	1810 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	NEDD4	P46934	1319 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	SYNGAP1	Q96PV0	1343 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663		B4E1Z4	1266 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	SNAI1	O95863	264 aa	Predicted RBP	14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	TAL1	P17542	331 aa	Predicted RBP	14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	TOB2	Q14106	344 aa	Predicted RBP	14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	PPP2R5B	Q15173	497 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	GJC2	Q5T442	439 aa	Predicted RBP	14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	ANO1	Q5XXA6	986 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	RASGRP2	Q7LDG7	609 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	SGMS1	Q86VZ5	419 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	ANKRD35	Q8N283	1001 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	AGBL1	Q96MI9	1066 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	GDF15	Q99988	308 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	UBAC1	Q9BSL1	405 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	ACAD9	Q9H845	621 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	ZSWIM5	Q9P217	1185 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663	CNPY2	Q9Y2B0	182 aa		14.01	□□□□□ -0.17
CTNS-205	ENST00000467663		A0A1W2PPC1	479 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	KBTBD13	C9JR72	458 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	DHX16	O60231	1041 aa	Known RBP	14	□□□□□ -0.17
CTNS-205	ENST00000467663	KDM4A	O75164	1064 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	SNHG28	P0DPA3	235 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	RARB	P10826	455 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	BMP8B	P34820	402 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	LRRC41	Q15345	812 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	CCDC96	Q2M329	555 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	DGKH	Q86XP1	1220 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	FGD4	Q96M96	766 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	HOMER2	Q9NSB8	354 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	RNF146	Q9NTX7	359 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	14	□□□□□ -0.17
CTNS-205	ENST00000467663	MTMR7	Q9Y216	660 aa		14	□□□□□ -0.17
CTNS-205	ENST00000467663	ICAM1	P05362	532 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	PDHB	P11177	359 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	AKR1A1	P14550	325 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	CPA1	P15085	419 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	SNAP25	P60880	206 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	TTBK2	Q6IQ55	1244 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	SYNE3	Q6ZMZ3	975 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	FAM133A	Q8N9E0	248 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	IGDCC4	Q8TDY8	1250 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	BRF1	Q92994	677 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	TRERF1	Q96PN7	1200 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	LLPH	Q9BRT6	129 aa	Known RBP	13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	RANBP17	Q9H2T7	1088 aa	Known RBP	13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	A1CF	Q9NQ94	594 aa	Known RBP	13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	XPNPEP3	Q9NQH7	507 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	PLXNA1	Q9UIW2	1896 aa		13.99	□□□□□ -0.17
CTNS-205	ENST00000467663	SH2B2	O14492	632 aa	Predicted RBP	13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	IFIT3	O14879	490 aa	Known RBP	13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	PFKFB2	O60825	505 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	ALAS1	P13196	640 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	SYN1	P17600	705 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	SLC16A2	P36021	539 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	ANTXR2	P58335	489 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	ZNF543	Q08ER8	600 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	WTAP	Q15007	396 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	TMEM67	Q5HYA8	995 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	SYDE2	Q5VT97	1194 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	CCDC174	Q6PII3	467 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	SLC39A5	Q6ZMH5	540 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	ANKS1A	Q92625	1134 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	SLK	Q9H2G2	1235 aa	Predicted RBP	13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	FAM184B	Q9ULE4	1060 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	TPCN1	Q9ULQ1	816 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	PHF24	Q9UPV7	400 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	KIF3A	Q9Y496	699 aa		13.98	□□□□□ -0.17
CTNS-205	ENST00000467663	TRIOBP	Q9H2D6	2365 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	SOWAHB	A6NEL2	793 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	POTEB2	H3BUK9	544 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ADAMTS4	O75173	837 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	CALM1	P0DP23	149 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	CALM2	P0DP24	149 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	CALM3	P0DP25	149 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ADCYAP1R1	P41586	468 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ATN1	P54259	1190 aa	Predicted RBP	13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	CNTN2	Q02246	1040 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ACVR2B	Q13705	512 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	SNX17	Q15036	470 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	ME3	Q16798	604 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	MUM1L1	Q5H9M0	696 aa		13.97	□□□□□ -0.17
CTNS-205	ENST00000467663	C1orf53	Q5VUE5	145 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms