RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-211ENST00000467553 SYNRGQ9UMZ2 1314 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 A0A0C4DFX4 3053 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 ASB14A6NK59 587 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 DCDC2CA8MYV0 355 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 CYP21A2P08686 494 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 ACLYP53396 1101 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 GJA9P57773 515 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 NKX3-2P78367 333 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 TRDNQ13061 729 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 BADQ92934 168 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 GLT1D1Q96MS3 346 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 SEZ6LQ9BYH1 1024 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 STARD7Q9NQZ5 370 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 ZHX1Q9UKY1 873 aaPredicted RBP16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
CCHCR1-211ENST00000467553 TRIM43BA6NCK2 446 aa16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 SMAD3P84022 425 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 FAM133AQ8N9E0 248 aa16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 TRIM43Q96BQ3 446 aaPredicted RBP16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 ZSCAN10Q96SZ4 725 aaPredicted RBP16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 GPCPD1Q9NPB8 672 aa16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 RBM8AQ9Y5S9 174 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-211ENST00000467553 FRMPD2Q68DX3 1309 aaPredicted RBP16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 LOC102724159A0A0B4J2E5 919 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 SNAP25P60880 206 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 PWP2Q15269 919 aaKnown RBP16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 KCNA10Q16322 511 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 Q7L0L9 218 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 ARMCX2Q7L311 632 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 TRERF1Q96PN7 1200 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 ANO2Q9NQ90 1003 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 RNF146Q9NTX7 359 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 TMEM39AQ9NV64 488 aa16.47■□□□□ 0.23
CCHCR1-211ENST00000467553 ZNF536O15090 1300 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 MCM3APO60318 1980 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 E7EWF7 191 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 RAG1P15918 1043 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 SLC16A2P36021 539 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 SHHQ15465 462 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 ZNF697Q5TEC3 545 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 CCDC174Q6PII3 467 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 SH3RF1Q7Z6J0 888 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 FGD4Q96M96 766 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 LSG1Q9H089 658 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 A1CFQ9NQ94 594 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 PRR12Q9ULL5 1215 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
CCHCR1-211ENST00000467553 TMEM265A0A087WTH1 108 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 PQBP1O60828 265 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 CDC45O75419 566 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 CABYRO75952 493 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 C6orf222P0C671 652 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 PDHBP11177 359 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 CDK7P50613 346 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 FAAP100Q0VG06 881 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 ENAHQ8N8S7 591 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 KATNBL1Q9H079 304 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 Q9Y3F1 56 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 TNKSO95271 1327 aa16.45■□□□□ 0.22
CCHCR1-211ENST00000467553 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 ZEB2O60315 1214 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 TIMP1P01033 207 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 ICAM1P05362 532 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 ASGR1P07306 291 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 ALAS1P13196 640 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 TNFAIP2Q03169 654 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 FPGSQ05932 587 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 GNASQ5JWF2 1037 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 SYDE2Q5VT97 1194 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 IQSEC1Q6DN90 963 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 ANKS1AQ92625 1134 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 MAF1Q9H063 256 aa16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 RANBP17Q9H2T7 1088 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-211ENST00000467553 ARVCFO00192 962 aa16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 IFIT3O14879 490 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 TLR3O15455 904 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
CCHCR1-211ENST00000467553 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms