RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SMPD1P17405 629 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 NEK9Q8TD19 979 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDAC3-203ENST00000467533 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 PRRX2Q99811 253 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
HDAC3-203ENST00000467533 FAM86C1Q9NVL1 165 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
HDAC3-203ENST00000467533 TET1Q8NFU7 2136 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 ZBED4O75132 1171 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 IRS1P35568 1242 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 ERVK-21P61565 698 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 WDR5P61964 334 aaKnown RBP12.35□□□□□ -0.43
HDAC3-203ENST00000467533 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 IER5LQ5T953 404 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 TMED8Q6PL24 325 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-203ENST00000467533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDAC3-203ENST00000467533 ADHFE1Q8IWW8 467 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 DCP1AQ9NPI6 582 aaPredicted RBP12.35□□□□□ -0.43
HDAC3-203ENST00000467533 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
HDAC3-203ENST00000467533 MUTYHQ9UIF7 546 aa12.35□□□□□ -0.43
HDAC3-203ENST00000467533 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
HDAC3-203ENST00000467533 LINC01553A4QN01 128 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 ASB14A6NK59 587 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 ATP2A1O14983 1001 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 DEFB103AP81534 67 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 SUGP1Q8IWZ8 645 aaKnown RBP12.34□□□□□ -0.43
HDAC3-203ENST00000467533 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
HDAC3-203ENST00000467533 PRPF38AQ8NAV1 312 aaKnown RBP12.34□□□□□ -0.43
HDAC3-203ENST00000467533 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 POLR3EQ9NVU0 708 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 GREB1LQ9C091 1923 aaPredicted RBP12.34□□□□□ -0.43
HDAC3-203ENST00000467533 MYH4Q9Y623 1939 aa12.34□□□□□ -0.43
HDAC3-203ENST00000467533 E9PSI1 815 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 GNAI2P04899 355 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 MYL3P08590 195 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 CDK8P49336 464 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 TCF15Q12870 199 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 BFSP2Q13515 415 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 TIGD5Q53EQ6 642 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 AMOTL1Q8IY63 956 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 LCORLQ8N3X6 602 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
HDAC3-203ENST00000467533 RAD9AQ99638 391 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
HDAC3-203ENST00000467533 PDGFCQ9NRA1 345 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 Q9Y3F1 56 aa12.33□□□□□ -0.44
HDAC3-203ENST00000467533 GJB5O95377 273 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 PURAQ00577 322 aaKnown RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 PTPROQ16827 1216 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 HERC4Q5GLZ8 1057 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 TMEM63BQ5T3F8 832 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 IQSEC1Q6DN90 963 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 FAM133AQ8N9E0 248 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 PPP1R13LQ8WUF5 828 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 PBXIP1Q96AQ6 731 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 PABPC5Q96DU9 382 aaKnown RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 MTG1Q9BT17 334 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 ACAD9Q9H845 621 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 SLC38A10Q9HBR0 1119 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-203ENST00000467533 SCN10AQ9Y5Y9 1956 aa12.32□□□□□ -0.44
HDAC3-203ENST00000467533 PLXNA3P51805 1871 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 NLRC5Q86WI3 1866 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 LCTP09848 1927 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 TECTAO75443 2155 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 CYP2D7A0A087X1C5 515 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 SOWAHBA6NEL2 793 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 NDUFB10O96000 172 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 PDE6AP16499 860 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 CPT1AP50416 773 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 PKN1Q16512 942 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 LRRFIP1Q32MZ4 808 aaKnown RBP12.31□□□□□ -0.44
HDAC3-203ENST00000467533 SLC9C2Q5TAH2 1124 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 CCDC155Q8N6L0 562 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 EDAQ92838 391 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 CLDND1Q9NY35 253 aa12.31□□□□□ -0.44
HDAC3-203ENST00000467533 TRIOO75962 3097 aa12.3□□□□□ -0.44
HDAC3-203ENST00000467533 TMEM221A6NGB7 291 aa12.3□□□□□ -0.44
HDAC3-203ENST00000467533 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms