RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KDM3BQ7LBC6 1761 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 OTOP1Q7RTM1 612 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 TP53INP2Q8IXH6 220 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 POU5F2Q8N7G0 328 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 AGBL3Q8NEM8 1001 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 EYA3Q99504 573 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 UTP14AQ9BVJ6 771 aaKnown RBP7.14□□□□□ -1.27
PTCD3-207ENST00000467273 CHMP4AQ9BY43 222 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 TRIOBPQ9H2D6 2365 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 RASSF4Q9H2L5 321 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 SH2B1Q9NRF2 756 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-207ENST00000467273 KIAA0100Q14667 2235 aaKnown RBP7.13□□□□□ -1.27
PTCD3-207ENST00000467273 TM4SF5O14894 197 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 ECE2O60344 883 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 GPTP24298 496 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 MPSTP25325 297 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 NF2P35240 595 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 MMP14P50281 582 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 TCIRG1Q13488 830 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 TAF7Q15545 349 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-207ENST00000467273 COX20Q5RI15 118 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 ADAMTSL4Q6UY14 1074 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 OR13H1Q8NG92 308 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 PNISRQ8TF01 805 aaKnown RBP7.13□□□□□ -1.27
PTCD3-207ENST00000467273 KLHDC7BQ96G42 594 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 ERO1AQ96HE7 468 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 SEC31BQ9NQW1 1179 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTCD3-207ENST00000467273 PTPN22Q9Y2R2 807 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 TRIM17Q9Y577 477 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 PSME4Q14997 1843 aa7.13□□□□□ -1.27
PTCD3-207ENST00000467273 RTL9Q8NET4 1388 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 A0A1W2PPC1 479 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 MANSC4A6NHS7 340 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-207ENST00000467273 UNCXA6NJT0 531 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 U2SURPO15042 1029 aaKnown RBP7.12□□□□□ -1.27
PTCD3-207ENST00000467273 NPR3P17342 541 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 MAPK1P28482 360 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 ARHGEF6Q15052 776 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 HSP90AB3PQ58FF7 597 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 ANGEL2Q5VTE6 544 aaKnown RBP7.12□□□□□ -1.27
PTCD3-207ENST00000467273 TTLL7Q6ZT98 887 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 OSBPL1AQ9BXW6 950 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 RNF208Q9H0X6 261 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 CCDC39Q9UFE4 941 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 HIF3AQ9Y2N7 669 aa7.12□□□□□ -1.27
PTCD3-207ENST00000467273 ANKRD33BA6NCL7 494 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 H0YGN5 161 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 UBE2Q2LH0YL09 131 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 FAM13AO94988 1023 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 ZBTB48P10074 688 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-207ENST00000467273 ERCC3P19447 782 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 EN2P19622 333 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-207ENST00000467273 NLRP12P59046 1061 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 ARMC9Q7Z3E5 817 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 ZNF333Q96JL9 665 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 PHACTR3Q96KR7 559 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 FBXL18Q96ME1 805 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 RUSC1Q9BVN2 902 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 ZC3H12CQ9C0D7 883 aaKnown RBP7.11□□□□□ -1.27
PTCD3-207ENST00000467273 DBNDD1Q9H9R9 158 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 DCTN4Q9UJW0 460 aa7.11□□□□□ -1.27
PTCD3-207ENST00000467273 SH3TC1Q8TE82 1336 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 TNFRSF10BO14763 440 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 FOSL1P15407 271 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 PTPRAP18433 802 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 MAP4P27816 1152 aaKnown RBP7.1□□□□□ -1.27
PTCD3-207ENST00000467273 PRKAR2BP31323 418 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 MSMPQ1L6U9 139 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-207ENST00000467273 OTUD7BQ6GQQ9 843 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 VSIG10LQ86VR7 867 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 NGEFQ8N5V2 710 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 MYOZ2Q9NPC6 264 aa7.1□□□□□ -1.27
PTCD3-207ENST00000467273 RRP7AQ9Y3A4 280 aaKnown RBP7.1□□□□□ -1.27
PTCD3-207ENST00000467273 COL1A1P02452 1464 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-207ENST00000467273 SCN9AQ15858 1988 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 TAF1P21675 1872 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 ASTN2O75129 1339 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-207ENST00000467273 RBM47A0AV96 593 aaKnown RBP7.09□□□□□ -1.27
PTCD3-207ENST00000467273 F13BP05160 661 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 MYL6BP14649 208 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 EIF4A1P60842 406 aaKnown RBP7.09□□□□□ -1.27
PTCD3-207ENST00000467273 SGO2Q562F6 1265 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 LDLRAD1Q5T700 205 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 CBLL1Q75N03 491 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 MCM10Q7L590 875 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 NLRP10Q86W26 655 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 GMLQ99445 158 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 PRO3102Q9H379 93 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 R3HDMLQ9H3Y0 253 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 STIM2Q9P246 746 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 POLLQ9UGP5 575 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 NUDCQ9Y266 331 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 UNC80Q8N2C7 3258 aa7.09□□□□□ -1.27
PTCD3-207ENST00000467273 LAMA3Q16787 3333 aa7.08□□□□□ -1.28
PTCD3-207ENST00000467273 HCLS1P14317 486 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms