RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FAM117BQ6P1L5 589 aa15.48■□□□□ 0.07
UBR4-210ENST00000466969 MAGEB6Q8N7X4 407 aa15.48■□□□□ 0.07
UBR4-210ENST00000466969 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.48■□□□□ 0.07
UBR4-210ENST00000466969 CHAMP1Q96JM3 812 aa15.48■□□□□ 0.07
UBR4-210ENST00000466969 DLL3Q9NYJ7 618 aa15.48■□□□□ 0.07
UBR4-210ENST00000466969 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
UBR4-210ENST00000466969 INSL6Q9Y581 213 aa15.48■□□□□ 0.07
UBR4-210ENST00000466969 ASTN1O14525 1302 aa15.47■□□□□ 0.07
UBR4-210ENST00000466969 A0A1W2PRG0 241 aa15.47■□□□□ 0.07
UBR4-210ENST00000466969 H3BNC9 293 aa15.47■□□□□ 0.07
UBR4-210ENST00000466969 CIAO1O76071 339 aa15.47■□□□□ 0.07
UBR4-210ENST00000466969 PDGFBP01127 241 aaPredicted RBP15.47■□□□□ 0.07
UBR4-210ENST00000466969 RFX5P48382 616 aaPredicted RBP15.47■□□□□ 0.07
UBR4-210ENST00000466969 RALBP1Q15311 655 aa15.47■□□□□ 0.07
UBR4-210ENST00000466969 CTC1Q2NKJ3 1217 aa15.47■□□□□ 0.07
UBR4-210ENST00000466969 EPC2Q52LR7 807 aa15.47■□□□□ 0.07
UBR4-210ENST00000466969 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.46■□□□□ 0.07
UBR4-210ENST00000466969 DYNC1LI2O43237 492 aaPredicted RBP15.46■□□□□ 0.07
UBR4-210ENST00000466969 GUCY1A2P33402 732 aa15.46■□□□□ 0.07
UBR4-210ENST00000466969 PPP4CP60510 307 aa15.46■□□□□ 0.07
UBR4-210ENST00000466969 CBX2Q14781 532 aaPredicted RBP15.46■□□□□ 0.07
UBR4-210ENST00000466969 LRRFIP1Q32MZ4 808 aaKnown RBP15.46■□□□□ 0.07
UBR4-210ENST00000466969 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.07
UBR4-210ENST00000466969 ARMCX2Q7L311 632 aa15.46■□□□□ 0.07
UBR4-210ENST00000466969 SPICE1Q8N0Z3 855 aa15.46■□□□□ 0.07
UBR4-210ENST00000466969 EHD4Q9H223 541 aa15.46■□□□□ 0.07
UBR4-210ENST00000466969 CEP250Q9BV73 2442 aa15.46■□□□□ 0.07
UBR4-210ENST00000466969 SPTBN2O15020 2390 aa15.46■□□□□ 0.06
UBR4-210ENST00000466969 USP24Q9UPU5 2620 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 DNAJC25-GNG10A0A024R161 153 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 MPHOSPH10O00566 681 aaKnown RBP15.45■□□□□ 0.06
UBR4-210ENST00000466969 TIMM10P62072 90 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 MVPQ14764 893 aaKnown RBP15.45■□□□□ 0.06
UBR4-210ENST00000466969 FAM47CQ5HY64 1035 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 CNKSR3Q6P9H4 555 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 SPATA5Q8NB90 893 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 GNEQ9Y223 722 aaKnown RBP15.45■□□□□ 0.06
UBR4-210ENST00000466969 TANC1Q9C0D5 1861 aa15.45■□□□□ 0.06
UBR4-210ENST00000466969 MYO7AQ13402 2215 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 MCM3APO60318 1980 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 ABHD14A-ACY1A0A1B0GW23 586 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 EFCAB14O75071 495 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 VAMP4O75379 141 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 IL15P40933 162 aaPredicted RBP15.44■□□□□ 0.06
UBR4-210ENST00000466969 MCAMP43121 646 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 KIAA1755Q5JYT7 1200 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 ZBTB33Q86T24 672 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 TTC6Q86TZ1 520 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 TMEM105Q8N8V8 129 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 HINFPQ9BQA5 517 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 ZNF214Q9UL59 606 aaPredicted RBP15.44■□□□□ 0.06
UBR4-210ENST00000466969 ADAMTS5Q9UNA0 930 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 NOD1Q9Y239 953 aa15.44■□□□□ 0.06
UBR4-210ENST00000466969 FOCADQ5VW36 1801 aa15.43■□□□□ 0.06
UBR4-210ENST00000466969 VWA5AO00534 786 aa15.43■□□□□ 0.06
UBR4-210ENST00000466969 WDR46O15213 610 aaKnown RBP15.43■□□□□ 0.06
UBR4-210ENST00000466969 TBX10O75333 385 aa15.43■□□□□ 0.06
UBR4-210ENST00000466969 LMNAP02545 664 aaKnown RBP15.43■□□□□ 0.06
UBR4-210ENST00000466969 ICAM3P32942 547 aa15.43■□□□□ 0.06
UBR4-210ENST00000466969 PTPN21Q16825 1174 aa15.43■□□□□ 0.06
UBR4-210ENST00000466969 PI16Q6UXB8 463 aa15.43■□□□□ 0.06
UBR4-210ENST00000466969 CCDC144CPQ8IYA2 1237 aa15.43■□□□□ 0.06
UBR4-210ENST00000466969 SH2B1Q9NRF2 756 aaPredicted RBP15.43■□□□□ 0.06
UBR4-210ENST00000466969 NDUFV1P49821 464 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 HYAL1Q12794 435 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 CCDC155Q8N6L0 562 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 XAGE2Q96GT9 111 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 RPGRIP1Q96KN7 1286 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 KATNBL1Q9H079 304 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 IGFLR1Q9H665 355 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 SH2D4AQ9H788 454 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 POLR3EQ9NVU0 708 aa15.42■□□□□ 0.06
UBR4-210ENST00000466969 EYA4O95677 639 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 SHMT1P34896 483 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 USP5P45974 858 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 SLC4A3P48751 1232 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 IKBKEQ14164 716 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 RSPO4Q2I0M5 234 aaPredicted RBP15.41■□□□□ 0.06
UBR4-210ENST00000466969 KIAA0319Q5VV43 1072 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 SNRNP48Q6IEG0 339 aaKnown RBP15.41■□□□□ 0.06
UBR4-210ENST00000466969 ANKRD35Q8N283 1001 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 TEX13BQ9BXU2 312 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 SEMA4AQ9H3S1 761 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 ARHGEF10LQ9HCE6 1279 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 GPHNQ9NQX3 736 aaPredicted RBP15.41■□□□□ 0.06
UBR4-210ENST00000466969 GPR179Q6PRD1 2367 aa15.41■□□□□ 0.06
UBR4-210ENST00000466969 TMEM192Q8IY95 271 aa15.4■□□□□ 0.06
UBR4-210ENST00000466969 AFAP1L1Q8TED9 768 aa15.4■□□□□ 0.06
UBR4-210ENST00000466969 PHF7Q9BWX1 381 aaPredicted RBP15.4■□□□□ 0.06
UBR4-210ENST00000466969 VCPKMTQ9H867 229 aa15.4■□□□□ 0.06
UBR4-210ENST00000466969 FBXO28Q9NVF7 368 aa15.4■□□□□ 0.06
UBR4-210ENST00000466969 Q9Y3F1 56 aa15.4■□□□□ 0.06
UBR4-210ENST00000466969 PCDHGC5Q9Y5F6 944 aa15.4■□□□□ 0.06
UBR4-210ENST00000466969 MYH1P12882 1939 aa15.4■□□□□ 0.06
UBR4-210ENST00000466969 PARP14Q460N5 1801 aa15.39■□□□□ 0.05
UBR4-210ENST00000466969 PARNO95453 639 aaKnown RBP15.39■□□□□ 0.05
UBR4-210ENST00000466969 HOXB3P14651 431 aaPredicted RBP15.39■□□□□ 0.05
UBR4-210ENST00000466969 SMPD1P17405 629 aa15.39■□□□□ 0.05
UBR4-210ENST00000466969 GORABQ5T7V8 394 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms