RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 MYH7P12883 1935 aa6.82□□□□□ -1.32
CXXC4-202ENST00000466963 HTRA4P83105 476 aaPredicted RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 UBE3AQ05086 875 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 CCDC144BQ3MJ40 725 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 TLK2Q86UE8 772 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 DCAF4Q8WV16 495 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 VTI1AQ96AJ9 217 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 NSUN3Q9H649 340 aaKnown RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 APBB1O00213 710 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 SELPP16109 830 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 GRB10Q13322 594 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 IKBKEQ14164 716 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 PLS1Q14651 629 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 ODR4Q5SWX8 454 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 SUGP1Q8IWZ8 645 aaKnown RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 ANKRD35Q8N283 1001 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 ACER1Q8TDN7 264 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 SCFD2Q8WU76 684 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 EDAQ92838 391 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 IWS1Q96ST2 819 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 DCP1AQ9NPI6 582 aaPredicted RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 ZHX1Q9UKY1 873 aaPredicted RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 SCN10AQ9Y5Y9 1956 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 IGKV6D-41A0A0C4DH26 115 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 CTAGE5O15320 804 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 PGK1P00558 417 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 SNRNP48Q6IEG0 339 aaKnown RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 RPAINQ86UA6 219 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 TNPO1Q92973 898 aaKnown RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 P2RX5Q93086 422 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 FERMT2Q96AC1 680 aa6.81□□□□□ -1.32
CXXC4-202ENST00000466963 DNAJC2Q99543 621 aaKnown RBP6.81□□□□□ -1.32
CXXC4-202ENST00000466963 A6NJR5 290 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 IQCF3P0C7M6 154 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 SMAD2Q15796 467 aaKnown RBP6.8□□□□□ -1.32
CXXC4-202ENST00000466963 BTNL9Q6UXG8 535 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 UBALD2Q8IYN6 164 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 KLHDC4Q8TBB5 520 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 MCM9Q9NXL9 1143 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 C1RP00736 705 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 CDK8P49336 464 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 CCDC96Q2M329 555 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 ALYREFQ86V81 257 aaKnown RBP6.8□□□□□ -1.32
CXXC4-202ENST00000466963 EPHX3Q9H6B9 360 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 CEP290O15078 2479 aa6.8□□□□□ -1.32
CXXC4-202ENST00000466963 H3BNC9 293 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 MPHOSPH10O00566 681 aaKnown RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 STAM2O75886 525 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 TTLL1O95922 423 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 GNAT1P11488 350 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 HOXD8P13378 290 aaPredicted RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 JAG1P78504 1218 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 OS9Q13438 667 aaPredicted RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 SKIV2LQ15477 1246 aaKnown RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 LRRC47Q8N1G4 583 aaKnown RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 KIF1BPQ96EK5 621 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 C11orf84Q9BUA3 381 aaPredicted RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 GJB5O95377 273 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 EYA4O95677 639 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 NOVP48745 357 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 PTCRAQ6ISU1 281 aaPredicted RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 CCDC84Q86UT8 332 aaPredicted RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 WNT8AQ9H1J5 351 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 FAM196BA6NMK8 535 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 PDE6AP16499 860 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 EDNRBP24530 442 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 STAT2P52630 851 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 PURAQ00577 322 aaKnown RBP6.79□□□□□ -1.32
CXXC4-202ENST00000466963 GHRHRQ02643 423 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 ZP2Q05996 745 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 PDE4BQ07343 736 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 TTLL4Q14679 1199 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 CYP26C1Q6V0L0 522 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 NACAP1Q9BZK3 213 aa6.79□□□□□ -1.32
CXXC4-202ENST00000466963 A0A1W2PRG0 241 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 B4GALT4O60513 344 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 FOXD2O60548 495 aaPredicted RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 IDH1O75874 414 aaKnown RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 BMP3P12645 472 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 EEF2P13639 858 aaKnown RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 ATP5JP18859 108 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 ZAP70P43403 619 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 COASYQ13057 564 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 MCF2L2Q86YR7 1114 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 CLASRPQ8N2M8 674 aaKnown RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 FBXL6Q8N531 539 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 NEDD1Q8NHV4 660 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 GPATCH3Q96I76 525 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 PIH1D3Q9NQM4 214 aaKnown RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 TCP11L1Q9NUJ3 509 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 ZMYM6O95789 1325 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 TCRBV5S4A2TA0A5A2 114 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 ZBBXA8MT70 800 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 ICAM1P05362 532 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 CASTP20810 708 aaKnown RBP6.78□□□□□ -1.32
CXXC4-202ENST00000466963 CYP2C18P33260 490 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 ADD2P35612 726 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 PBX2P40425 430 aa6.78□□□□□ -1.32
CXXC4-202ENST00000466963 NBL1P41271 181 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms