RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C1orf112Q9NSG2 853 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 NRBP2Q9NSY0 501 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 ERVV-1B6SEH8 477 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 RPS6KA4O75676 772 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 GSTA1P08263 222 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 GSTA2P09210 222 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 MMP10P09238 476 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 BTDP43251 543 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 PPARAQ07869 468 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 METTL23Q86XA0 190 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 VSIG1Q86XK7 387 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 CTAGE3PQ8IX95 158 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 GOLGA5Q8TBA6 731 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 AP5M1Q9H0R1 490 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 NCOA5Q9HCD5 579 aaKnown RBP9.56□□□□□ -0.88
HPS4-209ENST00000466781 PTPREP23469 700 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 MAGEA1P43355 309 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 RINT1Q6NUQ1 792 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 DPP9Q86TI2 863 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 NME8Q8N427 588 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 RAB17Q9H0T7 212 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 AMFRQ9UKV5 643 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 USH1CQ9Y6N9 552 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 AOX1Q06278 1338 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 C1orf167Q5SNV9 1468 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 hCG_1642624A0A1W2PR95 340 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 TXNDC9O14530 226 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 TMEM191BP0C7N4 346 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 GARSP41250 739 aaKnown RBP9.56□□□□□ -0.88
HPS4-209ENST00000466781 PIK3CAP42336 1068 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 BCAMP50895 628 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 FANCCQ00597 558 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 PAK2Q13177 524 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 TMCO4Q5TGY1 634 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 RYBPQ8N488 228 aaPredicted RBP9.56□□□□□ -0.88
HPS4-209ENST00000466781 IQCDQ96DY2 449 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 EDC3Q96F86 508 aaKnown RBP9.56□□□□□ -0.88
HPS4-209ENST00000466781 XPOTO43592 962 aaKnown RBP9.56□□□□□ -0.88
HPS4-209ENST00000466781 CCNA1P78396 465 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 TSNAXIP1Q2TAA8 658 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 CFAP221Q4G0U5 840 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
HPS4-209ENST00000466781 ZKSCAN5Q9Y2L8 839 aa9.56□□□□□ -0.88
HPS4-209ENST00000466781 BUB1BO60566 1050 aaPredicted RBP9.55□□□□□ -0.88
HPS4-209ENST00000466781 PROSER3Q2NL68 480 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 LONRF3Q496Y0 759 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 CERKLQ49MI3 558 aaPredicted RBP9.55□□□□□ -0.88
HPS4-209ENST00000466781 GBP6Q6ZN66 633 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 BBS5Q8N3I7 341 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 POMGNT1Q8WZA1 660 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 FAM8A1Q9UBU6 413 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 ATP10DQ9P241 1426 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 PRR16Q569H4 304 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 CC2D2BQ6DHV5 1058 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 PHKBQ93100 1093 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 APOL6Q9BWW8 343 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 BLZF1Q9H2G9 400 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 RIC8AQ9NPQ8 531 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 CPSF1Q10570 1443 aaKnown RBP9.55□□□□□ -0.88
HPS4-209ENST00000466781 NCAPD2Q15021 1401 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 TMTC1Q8IUR5 882 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 USP26Q9BXU7 913 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 GREM2Q9H772 168 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 PSTPIP2Q9H939 334 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 DBNDD1Q9H9R9 158 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 CCPG1Q9ULG6 757 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 HGSO14964 777 aaPredicted RBP9.55□□□□□ -0.88
HPS4-209ENST00000466781 TROVE2P10155 538 aaKnown RBP eCLIP9.55□□□□□ -0.88
HPS4-209ENST00000466781 LMNB1P20700 586 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 SUPT20HL1Q3ZLR7 823 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 LRRC24Q50LG9 513 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 KRT26Q7Z3Y9 468 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 GPIHBP1Q8IV16 184 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 DACT3Q96B18 629 aaPredicted RBP9.55□□□□□ -0.88
HPS4-209ENST00000466781 SUGCTQ9HAC7 445 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 SYNJ2BP-COX16A0A087WUM0 186 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 XRCC5P13010 732 aaKnown RBP9.55□□□□□ -0.88
HPS4-209ENST00000466781 ELMSAN1Q6PJG2 1045 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 FBXO11Q86XK2 927 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 C10orf67Q8IYJ2 551 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 COX16Q9P0S2 106 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 KCNJ14Q9UNX9 436 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 PTCH1Q13635 1447 aa9.55□□□□□ -0.88
HPS4-209ENST00000466781 A6NJR5 290 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 CIAPIN1Q6FI81 312 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 TYW1BQ6NUM6 668 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 VPS54Q9P1Q0 977 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 HEXIM1O94992 359 aaKnown RBP9.54□□□□□ -0.88
HPS4-209ENST00000466781 CDR2Q01850 454 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 ANKRD20A3Q5VUR7 823 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 JADE1Q6IE81 842 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 RRAGAQ7L523 313 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 VCX3AQ9NNX9 186 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 BAG5Q9UL15 447 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 RABGAP1Q9Y3P9 1069 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 RFC1P35251 1148 aaPredicted RBP9.54□□□□□ -0.88
HPS4-209ENST00000466781 KCTD2Q14681 263 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 MAP3K21Q5TCX8 1036 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 PANK4Q9NVE7 773 aa9.54□□□□□ -0.88
HPS4-209ENST00000466781 AKT3Q9Y243 479 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms