RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 PDCLQ13371 301 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 STK38Q15208 465 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
ABCF3-206ENST00000466742 TBC1D25Q3MII6 688 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 MSL1Q68DK7 614 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 LCORLQ8N3X6 602 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 KLHL23Q8NBE8 558 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 ZNF473Q8WTR7 871 aaKnown RBP17.26■□□□□ 0.35
ABCF3-206ENST00000466742 ZBTB10Q96DT7 871 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 MYO5AQ9Y4I1 1855 aaKnown RBP17.26■□□□□ 0.35
ABCF3-206ENST00000466742 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-206ENST00000466742 ZNF18P17022 549 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 ALDH1B1P30837 517 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 E2F5Q15329 346 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 EMC10Q5UCC4 262 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 TRAPPC11Q7Z392 1133 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 ADGRA1Q86SQ6 560 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 IFNL3Q8IZI9 196 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 AENQ8WTP8 325 aaKnown RBP17.26■□□□□ 0.35
ABCF3-206ENST00000466742 NSUN4Q96CB9 384 aaKnown RBP17.26■□□□□ 0.35
ABCF3-206ENST00000466742 CCDC114Q96M63 670 aa17.26■□□□□ 0.35
ABCF3-206ENST00000466742 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
ABCF3-206ENST00000466742 SPTLC2O15270 562 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 CTDNEP1O95476 244 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 RPSAP08865 295 aaKnown RBP17.25■□□□□ 0.35
ABCF3-206ENST00000466742 PFKFB1P16118 471 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 SPDYE1Q8NFV5 336 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-206ENST00000466742 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 WDR66Q8TBY9 1149 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 MASTLQ96GX5 879 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-206ENST00000466742 FAM184BQ9ULE4 1060 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 NR1I3Q14994 352 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 ZNF384Q8TF68 577 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 GDAP1L1Q96MZ0 367 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 SCLT1Q96NL6 688 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
ABCF3-206ENST00000466742 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
ABCF3-206ENST00000466742 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 PTPDC1A2A3K4 754 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-206ENST00000466742 LSP1P33241 339 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 SPTY2D1Q68D10 685 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-206ENST00000466742 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 NCOA7Q8NI08 942 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 NAPBQ9H115 298 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 SLC4A4Q9Y6R1 1079 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 ANKRD31Q8N7Z5 1873 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 MGRN1O60291 552 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 FECHP22830 423 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 PEX19P40855 299 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 MB21D2Q8IYB1 491 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-206ENST00000466742 TMX4Q9H1E5 349 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-206ENST00000466742 EBF2Q9HAK2 575 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 POLLQ9UGP5 575 aa17.24■□□□□ 0.35
ABCF3-206ENST00000466742 WDR19Q8NEZ3 1342 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 IL1R1P14778 569 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 FOSBP53539 338 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 MECOMQ03112 1051 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 IFT88Q13099 833 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 SNX1Q13596 522 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 TTMPQ5BVD1 217 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 ALS2CLQ60I27 953 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 CAPRIN2Q6IMN6 1127 aaKnown RBP17.23■□□□□ 0.35
ABCF3-206ENST00000466742 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 CD209Q9NNX6 404 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 SLC39A2Q9NP94 309 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 CACNA1SQ13698 1873 aa17.23■□□□□ 0.35
ABCF3-206ENST00000466742 PRKAB2O43741 272 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 PRDX5P30044 214 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 PSMD2Q13200 908 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 KDM7AQ6ZMT4 941 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 RASSF8Q8NHQ8 419 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 HOOK1Q9UJC3 728 aaKnown RBP17.22■□□□□ 0.35
ABCF3-206ENST00000466742 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 FESP07332 822 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 XRCC4Q13426 336 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 CCDC121Q6ZUS5 278 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 BZW1Q7L1Q6 419 aaKnown RBP17.22■□□□□ 0.35
ABCF3-206ENST00000466742 RALYLQ86SE5 291 aaKnown RBP17.22■□□□□ 0.35
ABCF3-206ENST00000466742 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 C3orf20Q8ND61 904 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 GPR101Q96P66 508 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-206ENST00000466742 CCT8L2Q96SF2 557 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 MMS19Q96T76 1030 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 LRRC2Q9BYS8 371 aa17.22■□□□□ 0.35
ABCF3-206ENST00000466742 ENO4A6NNW6 628 aa17.21■□□□□ 0.35
ABCF3-206ENST00000466742 AHCYL1O43865 530 aa17.21■□□□□ 0.35
ABCF3-206ENST00000466742 SMNDC1O75940 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
ABCF3-206ENST00000466742 ABL1P00519 1130 aa17.21■□□□□ 0.35
ABCF3-206ENST00000466742 SLMAPQ14BN4 828 aa17.21■□□□□ 0.35
ABCF3-206ENST00000466742 PTGISQ16647 500 aa17.21■□□□□ 0.35
ABCF3-206ENST00000466742 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
ABCF3-206ENST00000466742 MYCBPAPQ8TBZ2 947 aa17.21■□□□□ 0.35
ABCF3-206ENST00000466742 ARL8AQ96BM9 186 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms