RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 SHISA4Q96DD7 197 aa11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 TMEM106CQ9BVX2 250 aa11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 RNF208Q9H0X6 261 aa11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 BIN2Q9UBW5 565 aaPredicted RBP11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 FRMPD3Q5JV73 1810 aa11.04□□□□□ -0.64
SDCCAG3-208ENST00000466579 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 SGPL1O95470 568 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 PGK2P07205 417 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 ALAS1P13196 640 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 CYBAP13498 195 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 PSMA5P28066 241 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 GNAQP50148 359 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 GHRHRQ02643 423 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 UBE2Q1Q7Z7E8 422 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 ANKRD35Q8N283 1001 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 TRPV1Q8NER1 839 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 JAKMIP1Q96N16 626 aaKnown RBP11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 LZTS2Q9BRK4 669 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 TINF2Q9BSI4 451 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 LRRC2Q9BYS8 371 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 HMX1Q9NP08 348 aaPredicted RBP11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 CYP39A1Q9NYL5 469 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 ABCB11O95342 1321 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 SYNGAP1Q96PV0 1343 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 NID2Q14112 1375 aa11.03□□□□□ -0.64
SDCCAG3-208ENST00000466579 LRRC37A2A6NM11 1700 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 LOC102724159A0A0B4J2E5 919 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 CCDC69A6NI79 296 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 ZBTB5O15062 677 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 TAL1P17542 331 aaPredicted RBP11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 EN2P19622 333 aaPredicted RBP11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 RPS6KB1P23443 525 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 KIF5BP33176 963 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 CYP2C19P33261 490 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 EVCP57679 992 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 ANAPC15P60006 121 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 PWP2Q15269 919 aaKnown RBP11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 C8orf34Q49A92 452 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 LHX8Q68G74 356 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 APOA5Q6Q788 366 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 BLOC1S2Q6QNY1 142 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 FANCBQ8NB91 859 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 MORC4Q8TE76 937 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 U2AF1L4Q8WU68 220 aaKnown RBP11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 TCEANC2Q96MN5 208 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 HOMER2Q9NSB8 354 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 SLC12A7Q9Y666 1083 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 MCM3APO60318 1980 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 ASTN1O14525 1302 aa11.02□□□□□ -0.65
SDCCAG3-208ENST00000466579 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 NFIBO00712 420 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 TNRC18O15417 2968 aaPredicted RBP11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 PPP1R11O60927 126 aaPredicted RBP11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 CPA1P15085 419 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 CCND3P30281 292 aaPredicted RBP11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 CNTN2Q02246 1040 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 FUT2Q10981 343 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 NFXL1Q6ZNB6 911 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 RUFY3Q7L099 469 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 FBXO11Q86XK2 927 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 SAMD3Q8N6K7 520 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 CTCFLQ8NI51 663 aaPredicted RBP11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 NUP133Q8WUM0 1156 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 MYL10Q9BUA6 226 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 AMNQ9BXJ7 453 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 OGDHLQ9ULD0 1010 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 BRPF3Q9ULD4 1205 aa11.01□□□□□ -0.65
SDCCAG3-208ENST00000466579 PNMA6FA0A0J9YX94 578 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 OPLAHO14841 1288 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 SEPT4O43236 478 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 MSCO60682 206 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 PLEKHA8P1O95397 391 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 SNAI1O95863 264 aaPredicted RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 MYCP01106 439 aaPredicted RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 ZNF865P0CJ78 1059 aaPredicted RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 CASTP20810 708 aaKnown RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 SLC4A3P48751 1232 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 TRAF1Q13077 416 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 PPP2R5BQ15173 497 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 Q6ZUG5 572 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 SRBD1Q8N5C6 995 aaKnown RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 DEFB118Q96PH6 123 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 PIGSQ96S52 555 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 ALDH8A1Q9H2A2 487 aaPredicted RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 VAT1LQ9HCJ6 419 aa11□□□□□ -0.65
SDCCAG3-208ENST00000466579 FAM217BQ9NTX9 383 aaPredicted RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 RBM28Q9NW13 759 aaKnown RBP11□□□□□ -0.65
SDCCAG3-208ENST00000466579 MRPL11Q9Y3B7 192 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms