RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
PMF1-204ENST00000466489 MICU3Q86XE3 530 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 CPXCR1Q8N123 301 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 FBXL16Q8N461 479 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 SOCS4Q8WXH5 440 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 TCEANC2Q96MN5 208 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 SLC38A10Q9HBR0 1119 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 SLC5A4Q9NY91 659 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 PRR12Q9ULL5 1215 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 ADAMTS5Q9UNA0 930 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 TRIM17Q9Y577 477 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 GOLGA8BA8MQT2 603 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 ATP2A1O14983 1001 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 STRNO43815 780 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 NRDCO43847 1150 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 SLC16A2P36021 539 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 TROAPQ12815 778 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 TKFCQ3LXA3 575 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
PMF1-204ENST00000466489 APOA5Q6Q788 366 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.48□□□□□ -0.57
PMF1-204ENST00000466489 PLEKHH3Q7Z736 793 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 RIOX2Q8IUF8 465 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 BRF1Q92994 677 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
PMF1-204ENST00000466489 NAT10Q9H0A0 1025 aaKnown RBP11.48□□□□□ -0.57
PMF1-204ENST00000466489 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 TMEM63CQ9P1W3 806 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
PMF1-204ENST00000466489 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
PMF1-204ENST00000466489 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
PMF1-204ENST00000466489 ZNFX1Q9P2E3 1918 aaKnown RBP11.47□□□□□ -0.57
PMF1-204ENST00000466489 PALM3A6NDB9 673 aaPredicted RBP11.47□□□□□ -0.57
PMF1-204ENST00000466489 GOLGA8AA7E2F4 631 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.57
PMF1-204ENST00000466489 AK2P54819 239 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 KCTD2Q14681 263 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 TMEM132BQ14DG7 1078 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 RTN1Q16799 776 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 TTBK2Q6IQ55 1244 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 CCDC174Q6PII3 467 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 CPLX2Q6PUV4 134 aaKnown RBP11.47□□□□□ -0.57
PMF1-204ENST00000466489 RASGRP2Q7LDG7 609 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 FANCBQ8NB91 859 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 CHST13Q8NET6 341 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 MOV10L1Q9BXT6 1211 aaKnown RBP11.47□□□□□ -0.57
PMF1-204ENST00000466489 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
PMF1-204ENST00000466489 MAD2L2Q9UI95 211 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 ZNF214Q9UL59 606 aaPredicted RBP11.47□□□□□ -0.57
PMF1-204ENST00000466489 CCPG1Q9ULG6 757 aa11.47□□□□□ -0.57
PMF1-204ENST00000466489 RBBP6Q7Z6E9 1792 aaKnown RBP11.46□□□□□ -0.57
PMF1-204ENST00000466489 CNMDO75829 334 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 ECM2O94769 699 aaPredicted RBP11.46□□□□□ -0.57
PMF1-204ENST00000466489 ICAM1P05362 532 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 FCER1AP12319 257 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 CPA1P15085 419 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 ERCC3P19447 782 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 RGS2P41220 211 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 APOBRQ0VD83 1088 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 CDC37Q16543 378 aaPredicted RBP11.46□□□□□ -0.57
PMF1-204ENST00000466489 OTOP1Q7RTM1 612 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 GPR142Q7Z601 462 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 PIBF1Q8WXW3 757 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 RRP36Q96EU6 259 aaKnown RBP11.46□□□□□ -0.57
PMF1-204ENST00000466489 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 SPZ1Q9BXG8 430 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 AGXT2Q9BYV1 514 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 SENP2Q9HC62 589 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 RAVER2Q9HCJ3 691 aaKnown RBP11.46□□□□□ -0.57
PMF1-204ENST00000466489 VAT1LQ9HCJ6 419 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
PMF1-204ENST00000466489 RBM27Q9P2N5 1060 aaKnown RBP11.46□□□□□ -0.57
PMF1-204ENST00000466489 SRRDQ9UH36 339 aa11.46□□□□□ -0.57
PMF1-204ENST00000466489 ZSWIM8A7E2V4 1837 aa11.46□□□□□ -0.58
PMF1-204ENST00000466489 ZNF236Q9UL36 1845 aa11.46□□□□□ -0.58
PMF1-204ENST00000466489 PLXNA1Q9UIW2 1896 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 SLC15A5A6NIM6 579 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 CPLX1O14810 134 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 ZBTB5O15062 677 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 ALAS1P13196 640 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 RXRAP19793 462 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
PMF1-204ENST00000466489 Q3C1V9 767 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 FBXO46Q6PJ61 603 aaPredicted RBP11.45□□□□□ -0.58
PMF1-204ENST00000466489 DPP9Q86TI2 863 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 TRMT44Q8IYL2 757 aaKnown RBP11.45□□□□□ -0.58
PMF1-204ENST00000466489 TNS4Q8IZW8 715 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 ABRAQ8N0Z2 381 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 STAG2Q8N3U4 1231 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 PDCL2Q8N4E4 241 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms