RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ATP2B4P23634 1241 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 GNA11P29992 359 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 KLK7P49862 253 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 STIM1Q13586 685 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 CYP26C1Q6V0L0 522 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 REXO1Q8N1G1 1221 aaKnown RBP11.69□□□□□ -0.54
UFD1-206ENST00000466373 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
UFD1-206ENST00000466373 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 PARD6BQ9BYG5 372 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 ATP2B2Q01814 1243 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 UTP14CQ5TAP6 766 aaKnown RBP11.68□□□□□ -0.54
UFD1-206ENST00000466373 KRT25Q7Z3Z0 450 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 GPIHBP1Q8IV16 184 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 CCDC51Q96ER9 411 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 RBM17Q96I25 401 aaKnown RBP11.68□□□□□ -0.54
UFD1-206ENST00000466373 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 FAM53CQ9NYF3 392 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 MAGEC2Q9UBF1 373 aaPredicted RBP11.68□□□□□ -0.54
UFD1-206ENST00000466373 DAGLAQ9Y4D2 1042 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 RAD21O60216 631 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 RHOBTB3O94955 611 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 GJA10Q969M2 543 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 EXOC1Q9NV70 894 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 GUCA1BQ9UMX6 200 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 DDX60LQ5H9U9 1706 aaKnown RBP11.68□□□□□ -0.54
UFD1-206ENST00000466373 ZRANB2O95218 330 aaKnown RBP eCLIP11.68□□□□□ -0.541e-31■■□□□ 13.7
UFD1-206ENST00000466373 PDHBP11177 359 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 AKR1B1P15121 316 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 SCNN1DP51172 638 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 CHMP4BP1P59074 171 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 KCNB1Q14721 858 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 CRY2Q49AN0 593 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 ANKRD40Q6AI12 368 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 TTI2Q6NXR4 508 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 DPP8Q6V1X1 898 aaPredicted RBP11.68□□□□□ -0.54
UFD1-206ENST00000466373 RSRC2Q7L4I2 434 aaKnown RBP11.68□□□□□ -0.54
UFD1-206ENST00000466373 GOLGA1Q92805 767 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
UFD1-206ENST00000466373 SLC39A2Q9NP94 309 aa11.68□□□□□ -0.54
UFD1-206ENST00000466373 CTAGE9A4FU28 777 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 LGALS16A8MUM7 142 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 LAD1O00515 517 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 SASH3O75995 380 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 TDP2O95551 362 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 PLCG2P16885 1265 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 PRPHP41219 470 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 PLA2G4AP47712 749 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 MEX3CQ5U5Q3 659 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 DYMQ7RTS9 669 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 DUSP9Q99956 384 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 MMTAG2Q9BU76 263 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 AGPAT5Q9NUQ2 364 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 LUC7L2Q9Y383 392 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 EPN1Q9Y6I3 576 aaPredicted RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 MYH1P12882 1939 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 POTEMA6NI47 508 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 SLC37A4O43826 429 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 TRIM21P19474 475 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 ARHGAP25P42331 645 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 DDR1Q08345 913 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 TERF2Q15554 542 aa11.67□□□□□ -0.54
UFD1-206ENST00000466373 DDX4Q9NQI0 724 aaKnown RBP11.67□□□□□ -0.54
UFD1-206ENST00000466373 NDUFA10O95299 355 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 SLC16A2P36021 539 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 TNNI2P48788 182 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 UBE2SQ16763 222 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 C15orf52Q6ZUT6 534 aaKnown RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 OR8K1Q8NGG5 319 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 REXO2Q9Y3B8 237 aaKnown RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 ENC1O14682 589 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 EEF1GP26641 437 aaKnown RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 MTIF2P46199 727 aaKnown RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 GABPB1Q06547 395 aaPredicted RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 CALCRLQ16602 461 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 TTBK2Q6IQ55 1244 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 SRGAP1Q7Z6B7 1085 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 ZNF507Q8TCN5 953 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 P2RX5Q93086 422 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 CNOT6LQ96LI5 555 aaKnown RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 MTMR4Q9NYA4 1195 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
UFD1-206ENST00000466373 BBOX1O75936 387 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 RHOXF2BP0C7M4 288 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 FECHP22830 423 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 TBC1D8BQ0IIM8 1120 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 TRIM14Q14142 442 aa11.66□□□□□ -0.54
UFD1-206ENST00000466373 MCM6Q14566 821 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms