RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CYP26C1Q6V0L0 522 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 C16orf86Q6ZW13 317 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 LUC7L2Q9Y383 392 aaKnown RBP18.34■□□□□ 0.53
SLX4-202ENST00000466154 CTAGE9A4FU28 777 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 POTEMA6NI47 508 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 H7C1D1 291 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 TDP2O95551 362 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 AKR1B1P15121 316 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 KRT25Q7Z3Z0 450 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 IRF2BP1Q8IU81 584 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 GOLGA1Q92805 767 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 NAA15Q9BXJ9 866 aaKnown RBP18.34■□□□□ 0.53
SLX4-202ENST00000466154 PARD6BQ9BYG5 372 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 TCP10Q12799 353 aa18.33■□□□□ 0.53
SLX4-202ENST00000466154 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.53
SLX4-202ENST00000466154 PRDM4Q9UKN5 801 aa18.33■□□□□ 0.53
SLX4-202ENST00000466154 TTF2Q9UNY4 1162 aaKnown RBP18.33■□□□□ 0.53
SLX4-202ENST00000466154 GPR75-ASB3A0A0A6YYF3 556 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 M0R2N6 131 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 TBC1D8BQ0IIM8 1120 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 KCTD1Q719H9 257 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 TMTC1Q8IUR5 882 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 CALML4Q96GE6 196 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 FHOD1Q9Y613 1164 aa18.33■□□□□ 0.52
SLX4-202ENST00000466154 RAD51AP2Q09MP3 1159 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 MCM6Q14566 821 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 CT47A1Q5JQC4 288 aaPredicted RBP18.32■□□□□ 0.52
SLX4-202ENST00000466154 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 TUBGCP2Q9BSJ2 902 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 ZMYND12Q9H0C1 365 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 AGPAT5Q9NUQ2 364 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 DAGLAQ9Y4D2 1042 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 NKRFO15226 690 aaKnown RBP eCLIP18.32■□□□□ 0.52
SLX4-202ENST00000466154 TRIM37O94972 964 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
SLX4-202ENST00000466154 RHBDL3P58872 404 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 PDE4CQ08493 712 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 CALCRLQ16602 461 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 ANKRD40Q6AI12 368 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 MB21D1Q8N884 522 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 LRWD1Q9UFC0 647 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
SLX4-202ENST00000466154 KLRC4O43908 158 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 PLCG2P16885 1265 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 KIAA1328Q86T90 577 aa18.32■□□□□ 0.52
SLX4-202ENST00000466154 LRRC41Q15345 812 aa18.31■□□□□ 0.52
SLX4-202ENST00000466154 GTPBP4Q9BZE4 634 aaKnown RBP18.31■□□□□ 0.52
SLX4-202ENST00000466154 TRIM9Q9C026 710 aa18.31■□□□□ 0.52
SLX4-202ENST00000466154 ZSCAN29Q8IWY8 852 aaPredicted RBP18.31■□□□□ 0.52
SLX4-202ENST00000466154 GJD4Q96KN9 370 aaPredicted RBP18.31■□□□□ 0.52
SLX4-202ENST00000466154 CAPZA3Q96KX2 299 aa18.31■□□□□ 0.52
SLX4-202ENST00000466154 CNOT6LQ96LI5 555 aaKnown RBP18.31■□□□□ 0.52
SLX4-202ENST00000466154 NOC4LQ9BVI4 516 aaKnown RBP18.31■□□□□ 0.52
SLX4-202ENST00000466154 ZC3H12CQ9C0D7 883 aaKnown RBP18.31■□□□□ 0.52
SLX4-202ENST00000466154 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
SLX4-202ENST00000466154 USP40Q9NVE5 1235 aa18.31■□□□□ 0.52
SLX4-202ENST00000466154 TBC1D7Q9P0N9 293 aa18.31■□□□□ 0.52
SLX4-202ENST00000466154 SLC37A4O43826 429 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 PDHBP11177 359 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
SLX4-202ENST00000466154 NCAPH2Q6IBW4 605 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 ANKS1AQ92625 1134 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
SLX4-202ENST00000466154 KBTBD4Q9NVX7 518 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
SLX4-202ENST00000466154 SLF2Q8IX21 1173 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 OR8K1Q8NGG5 319 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 HINFPQ9BQA5 517 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 LZTS2Q9BRK4 669 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 SPZ1Q9BXG8 430 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 ZHX3Q9H4I2 956 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 RREB1Q92766 1687 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 TNRC6CQ9HCJ0 1690 aaKnown RBP18.3■□□□□ 0.52
SLX4-202ENST00000466154 ADCY7P51828 1080 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 CYP27A1Q02318 531 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
SLX4-202ENST00000466154 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 CCSER1Q9C0I3 900 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 ARFGAP3Q9NP61 516 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 HDAC6Q9UBN7 1215 aa18.3■□□□□ 0.52
SLX4-202ENST00000466154 CCDC122Q5T0U0 273 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 FAM207AQ9NSI2 230 aaPredicted RBP18.29■□□□□ 0.52
SLX4-202ENST00000466154 CCDC88AQ3V6T2 1871 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 SRCAPQ6ZRS2 3230 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 LGALS16A8MUM7 142 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 NDUFA10O95299 355 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 SNAP25P60880 206 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 DDR1Q08345 913 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 SV2BQ7L1I2 683 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 GPR161Q8N6U8 529 aaKnown RBP18.29■□□□□ 0.52
SLX4-202ENST00000466154 GIMAP8Q8ND71 665 aaPredicted RBP18.29■□□□□ 0.52
SLX4-202ENST00000466154 P2RX5Q93086 422 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 NAPGQ99747 312 aaPredicted RBP18.29■□□□□ 0.52
SLX4-202ENST00000466154 MYH8P13535 1937 aa18.29■□□□□ 0.52
SLX4-202ENST00000466154 MACROD2A1Z1Q3 448 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms