RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 F6X3S4 739 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 RGS13O14921 159 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 SIGLEC6O43699 453 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 GREM1O60565 184 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 C6P13671 934 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 SNW1Q13573 536 aaKnown RBP6.93□□□□□ -1.3
LRCH3-211ENST00000466054 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 JAMLQ86YT9 394 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 GOLM1Q8NBJ4 401 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 ZNF526Q8TF50 670 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-211ENST00000466054 ZNF296Q8WUU4 475 aaPredicted RBP6.93□□□□□ -1.3
LRCH3-211ENST00000466054 C8orf49Q96NF6 230 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 CHST7Q9NS84 486 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 PRR36Q9H6K5 1346 aa6.93□□□□□ -1.3
LRCH3-211ENST00000466054 F13A1P00488 732 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 NBPF12Q5TAG4 269 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-211ENST00000466054 FAM196AQ6ZSG2 479 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 SPATA32Q96LK8 384 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 MRIQ9BWK5 157 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 NT5C1AQ9BXI3 368 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 LRRC3Q9BY71 257 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 DUSP10Q9Y6W6 482 aa6.92□□□□□ -1.3
LRCH3-211ENST00000466054 FAM221AA4D161 298 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
LRCH3-211ENST00000466054 CYBBP04839 570 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 ZC3H6P61129 1189 aaKnown RBP6.91□□□□□ -1.3
LRCH3-211ENST00000466054 MPP2Q14168 576 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 ARSHQ5FYA8 562 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 BICRALQ6AI39 1079 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 PAQR3Q6TCH7 311 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 USP51Q70EK9 711 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 C8orf37Q96NL8 207 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 LNPKQ9C0E8 428 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 PRDM14Q9GZV8 571 aa6.91□□□□□ -1.3
LRCH3-211ENST00000466054 SH3D21A4FU49 640 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 C1QTNF3-AMACRE9PGA6 284 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 NOBOXO60393 691 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 ZNF20P17024 532 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 GJA8P48165 433 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 GNL2Q13823 731 aaKnown RBP6.9□□□□□ -1.3
LRCH3-211ENST00000466054 CARFQ8N187 725 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 SAMD11Q96NU1 681 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 JMJD8Q96S16 334 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 MENTQ9BUN1 341 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 RNF38Q9H0F5 515 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 ACBD3Q9H3P7 528 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 MINPP1Q9UNW1 487 aa6.9□□□□□ -1.3
LRCH3-211ENST00000466054 UBOX5O94941 541 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 NCAM1P13591 858 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 TACR2P21452 398 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 PAK2Q13177 524 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 TTC9BQ8N6N2 239 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 RASGRP4Q8TDF6 673 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 SCAND2PQ9GZW5 306 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-211ENST00000466054 ANTXR1Q9H6X2 564 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 INPP5FQ9Y2H2 1132 aa6.89□□□□□ -1.31
LRCH3-211ENST00000466054 POLR3KQ9Y2Y1 108 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-211ENST00000466054 DNAJA2O60884 412 aa6.88□□□□□ -1.31
LRCH3-211ENST00000466054 CLEC3AO75596 197 aa6.88□□□□□ -1.31
LRCH3-211ENST00000466054 BMP8BP34820 402 aa6.88□□□□□ -1.31
LRCH3-211ENST00000466054 APOBRQ0VD83 1088 aa6.88□□□□□ -1.31
LRCH3-211ENST00000466054 COL9A2Q14055 689 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-211ENST00000466054 CWF19L2Q2TBE0 894 aaKnown RBP6.88□□□□□ -1.31
LRCH3-211ENST00000466054 SLITRK4Q8IW52 837 aa6.88□□□□□ -1.31
LRCH3-211ENST00000466054 GPRASP2Q96D09 838 aa6.88□□□□□ -1.31
LRCH3-211ENST00000466054 MKRN2Q9H000 416 aaKnown RBP6.88□□□□□ -1.31
LRCH3-211ENST00000466054 F8W031 263 aaPredicted RBP6.87□□□□□ -1.31
LRCH3-211ENST00000466054 ZNF205O95201 554 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 DBHP09172 617 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 ATF2P15336 505 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 HLA-DQA1Q5Y7H0 255 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 ZFPM1Q8IX07 1006 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 SLC43A3Q8NBI5 491 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 KISS1RQ969F8 398 aaPredicted RBP6.87□□□□□ -1.31
LRCH3-211ENST00000466054 NKD1Q969G9 470 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 ZNF512BQ96KM6 892 aaPredicted RBP6.87□□□□□ -1.31
LRCH3-211ENST00000466054 SLITRK6Q9H5Y7 841 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 CAPN10Q9HC96 672 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 GFOD1Q9NXC2 390 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 UBP1Q9NZI7 540 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 NTMQ9P121 344 aa6.87□□□□□ -1.31
LRCH3-211ENST00000466054 CYR61O00622 381 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 SRGAP3O43295 1099 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 VAV1P15498 845 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
LRCH3-211ENST00000466054 HTRA3P83110 453 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 PRR5P85299 388 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 MVKQ03426 396 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 VPS37DQ86XT2 251 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 ALG3Q92685 438 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 DVL3Q92997 716 aaPredicted RBP6.86□□□□□ -1.31
LRCH3-211ENST00000466054 TINF2Q9BSI4 451 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 C1QTNF3Q9BXJ4 246 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 PCDHB12Q9Y5F1 795 aa6.86□□□□□ -1.31
LRCH3-211ENST00000466054 HCFC2Q9Y5Z7 792 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms