RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 FRAT2O75474 233 aaPredicted RBP7.92□□□□□ -1.14
TPM3-214ENST00000466010 CIAO1O76071 339 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 GNAI3P08754 354 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 ETFBP38117 255 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 LBX1P52954 281 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 NBPF9Q3BBW0 867 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 SUPT20HL1Q3ZLR7 823 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 SNAP47Q5SQN1 464 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 MFSD14BQ5SR56 506 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 ARMC9Q7Z3E5 817 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 ANKRD44Q8N8A2 993 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 GLIS3Q8NEA6 775 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 TDRD7Q8NHU6 1098 aaKnown RBP7.92□□□□□ -1.14
TPM3-214ENST00000466010 KAZALD1Q96I82 304 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 ZBED3Q96IU2 234 aaPredicted RBP7.92□□□□□ -1.14
TPM3-214ENST00000466010 CEP44Q9C0F1 390 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 GNL3LQ9NVN8 582 aaKnown RBP7.92□□□□□ -1.14
TPM3-214ENST00000466010 SNTG2Q9NY99 539 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 PRKAB1Q9Y478 270 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 MAST3O60307 1309 aa7.92□□□□□ -1.14
TPM3-214ENST00000466010 TTC24A2A3L6 582 aaPredicted RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 EYA2O00167 538 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 SPINT1O43278 529 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 KLF4O43474 513 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 AOC2O75106 756 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 HSPA8P11142 646 aaKnown RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 SLC5A1P13866 664 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 RARSP54136 660 aaKnown RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 CHMP4BP1P59074 171 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 APOBRQ0VD83 1088 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 FOXC1Q12948 553 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 MAP3K11Q16584 847 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 ZNF697Q5TEC3 545 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 SPRYD7Q5W111 196 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 DIEXFQ68CQ4 756 aaKnown RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 FILIP1Q7Z7B0 1213 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 HNRNPLLQ8WVV9 542 aaKnown RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 LPIN2Q92539 896 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 HOOK2Q96ED9 719 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 FAM84BQ96KN1 310 aaPredicted RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 RHOVQ96L33 236 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 MRIQ9BWK5 157 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 SRRTQ9BXP5 876 aaKnown RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 DEFB129Q9H1M3 183 aa7.91□□□□□ -1.14
TPM3-214ENST00000466010 NOB1Q9ULX3 412 aaKnown RBP7.91□□□□□ -1.14
TPM3-214ENST00000466010 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 FAM155AB1AL88 458 aaPredicted RBP7.9□□□□□ -1.14
TPM3-214ENST00000466010 DNAJC6O75061 913 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 IL15P40933 162 aaPredicted RBP7.9□□□□□ -1.14
TPM3-214ENST00000466010 LIG3P49916 1009 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 RBM5P52756 815 aaKnown RBP eCLIP7.9□□□□□ -1.14
TPM3-214ENST00000466010 SREBF2Q12772 1141 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 POU4F2Q12837 409 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 CFAP100Q494V2 611 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 INTS3Q68E01 1043 aaKnown RBP7.9□□□□□ -1.14
TPM3-214ENST00000466010 VGLL2Q8N8G2 317 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 WDR66Q8TBY9 1149 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 NKD1Q969G9 470 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 RNPC3Q96LT9 517 aaKnown RBP7.9□□□□□ -1.14
TPM3-214ENST00000466010 TRIM56Q9BRZ2 755 aaKnown RBP7.9□□□□□ -1.14
TPM3-214ENST00000466010 MXD3Q9BW11 206 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 PUS3Q9BZE2 481 aaKnown RBP7.9□□□□□ -1.14
TPM3-214ENST00000466010 LIN7BQ9HAP6 207 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 SPC25Q9HBM1 224 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 BRD7Q9NPI1 651 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 COL4A3BPQ9Y5P4 624 aa7.9□□□□□ -1.14
TPM3-214ENST00000466010 ASTN2O75129 1339 aaPredicted RBP7.89□□□□□ -1.15
TPM3-214ENST00000466010 A0A1W2PNR3 127 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 SNAP23O00161 211 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 GYG1P46976 350 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 IREB2P48200 963 aaKnown RBP7.89□□□□□ -1.15
TPM3-214ENST00000466010 INHBEP58166 350 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 RASA3Q14644 834 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 LRRC24Q50LG9 513 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 FBXL19Q6PCT2 694 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 ATF7IPQ6VMQ6 1270 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 LYSMD3Q7Z3D4 306 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 RASAL3Q86YV0 1011 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 ZGPATQ8N5A5 531 aaKnown RBP7.89□□□□□ -1.15
TPM3-214ENST00000466010 CERS5Q8N5B7 392 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 PHC3Q8NDX5 983 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 TEKT1Q969V4 418 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 EMID1Q96A84 441 aaPredicted RBP7.89□□□□□ -1.15
TPM3-214ENST00000466010 ABCB6Q9NP58 842 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 TIMMDC1Q9NPL8 285 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 TMOD2Q9NZR1 351 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 KANSL3Q9P2N6 904 aa7.89□□□□□ -1.15
TPM3-214ENST00000466010 ZNF646O15015 1829 aaPredicted RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 F8W031 263 aaPredicted RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 CDC45O75419 566 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 FBXO24O75426 580 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 ZBTB48P10074 688 aaPredicted RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 FGFR2P21802 821 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 MSX1P28360 303 aa7.88□□□□□ -1.15
TPM3-214ENST00000466010 RFX5P48382 616 aaPredicted RBP7.88□□□□□ -1.15
TPM3-214ENST00000466010 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
TPM3-214ENST00000466010 KIF23Q02241 960 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms