RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 GRK4P32298 578 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 ADD1P35611 737 aaKnown RBP21.33■■□□□ 1.01
HOXA9-203ENST00000465941 TRAF1Q13077 416 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 TRMT44Q8IYL2 757 aaKnown RBP21.33■■□□□ 1.01
HOXA9-203ENST00000465941 TNS4Q8IZW8 715 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 ANKRD35Q8N283 1001 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 SLAIN1Q8ND83 568 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 CLEC4DQ8WXI8 215 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 RRP36Q96EU6 259 aaKnown RBP21.33■■□□□ 1.01
HOXA9-203ENST00000465941 APBA2Q99767 749 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 SLC5A4Q9NY91 659 aa21.33■■□□□ 1.01
HOXA9-203ENST00000465941 ABCB11O95342 1321 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 DNAJC25-GNG10A0A024R161 153 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 PPP1R11O60927 126 aaPredicted RBP21.32■■□□□ 1
HOXA9-203ENST00000465941 AK2P54819 239 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 FUT2Q10981 343 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 USH1GQ495M9 461 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 SLC9C1Q4G0N8 1177 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 HOMER1Q86YM7 354 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 CCDC82Q8N4S0 544 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 IL27Q8NEV9 243 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 DDX11Q96FC9 970 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 LARP6Q9BRS8 491 aaKnown RBP21.32■■□□□ 1
HOXA9-203ENST00000465941 MAF1Q9H063 256 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 DIS3Q9Y2L1 958 aaKnown RBP21.32■■□□□ 1
HOXA9-203ENST00000465941 PLXNB2O15031 1838 aa21.32■■□□□ 1
HOXA9-203ENST00000465941 TAL1P17542 331 aaPredicted RBP21.31■■□□□ 1
HOXA9-203ENST00000465941 RGS22Q8NE09 1264 aa21.31■■□□□ 1
HOXA9-203ENST00000465941 NPLOC4Q8TAT6 608 aa21.31■■□□□ 1
HOXA9-203ENST00000465941 ARMC5Q96C12 935 aa21.31■■□□□ 1
HOXA9-203ENST00000465941 A1CFQ9NQ94 594 aaKnown RBP21.31■■□□□ 1
HOXA9-203ENST00000465941 MRPL11Q9Y3B7 192 aaKnown RBP21.31■■□□□ 1
HOXA9-203ENST00000465941 PCDHA1Q9Y5I3 950 aa21.31■■□□□ 1
HOXA9-203ENST00000465941 ZNF236Q9UL36 1845 aa21.31■■□□□ 1
HOXA9-203ENST00000465941 PFASO15067 1338 aa21.3■■□□□ 1
HOXA9-203ENST00000465941 NFIBO00712 420 aa21.3■■□□□ 1
HOXA9-203ENST00000465941 PGK2P07205 417 aa21.3■■□□□ 1
HOXA9-203ENST00000465941 ELNP15502 786 aa21.3■■□□□ 1
HOXA9-203ENST00000465941 ZNF792Q3KQV3 632 aa21.3■■□□□ 1
HOXA9-203ENST00000465941 CYP39A1Q9NYL5 469 aa21.3■■□□□ 1
HOXA9-203ENST00000465941 SEC63Q9UGP8 760 aaKnown RBP21.3■■□□□ 1
HOXA9-203ENST00000465941 TPCN1Q9ULQ1 816 aa21.3■■□□□ 1
HOXA9-203ENST00000465941 DOCK3Q8IZD9 2030 aa21.29■■□□□ 1
HOXA9-203ENST00000465941 IGHA2P01877 340 aa21.29■■□□□ 1
HOXA9-203ENST00000465941 CCT2P78371 535 aaKnown RBP21.29■■□□□ 1
HOXA9-203ENST00000465941 CCL14Q16627 93 aa21.29■■□□□ 1
HOXA9-203ENST00000465941 SH3TC2Q8TF17 1288 aa21.29■■□□□ 1
HOXA9-203ENST00000465941 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
HOXA9-203ENST00000465941 TRIB2Q92519 343 aa21.29■■□□□ 1
HOXA9-203ENST00000465941 CNTNAP5Q8WYK1 1306 aa21.29■■□□□ 1
HOXA9-203ENST00000465941 HMGCRP04035 888 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 RABEP1Q15276 862 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 NTRK3Q16288 839 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 OLFML2BQ68BL8 750 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 NSMFQ6X4W1 530 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 MCF2L2Q86YR7 1114 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 FAM133AQ8N9E0 248 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 ABHD8Q96I13 439 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 MAML3Q96JK9 1138 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 NCOA5Q9HCD5 579 aaKnown RBP21.28■■□□□ 1
HOXA9-203ENST00000465941 FLRT1Q9NZU1 646 aa21.28■■□□□ 1
HOXA9-203ENST00000465941 V9GY48 417 aaPredicted RBP21.28■■□□□ 1
HOXA9-203ENST00000465941 POTEB2H3BUK9 544 aa21.27■■□□□ 1
HOXA9-203ENST00000465941 PFKFB2O60825 505 aa21.27■■□□□ 1
HOXA9-203ENST00000465941 BAATQ14032 418 aaPredicted RBP21.27■■□□□ 1
HOXA9-203ENST00000465941 ZNF467Q7Z7K2 595 aaPredicted RBP21.27■■□□□ 1
HOXA9-203ENST00000465941 ZNF333Q96JL9 665 aa21.27■■□□□ 1
HOXA9-203ENST00000465941 BIN2Q9UBW5 565 aaPredicted RBP21.27■■□□□ 1
HOXA9-203ENST00000465941 IFNAR1P17181 557 aa21.26■□□□□ 0.99
HOXA9-203ENST00000465941 STK3Q13188 491 aa21.26■□□□□ 0.99
HOXA9-203ENST00000465941 RNF207Q6ZRF8 634 aa21.26■□□□□ 0.99
HOXA9-203ENST00000465941 MSL3Q8N5Y2 521 aaKnown RBP21.26■□□□□ 0.99
HOXA9-203ENST00000465941 SAMD3Q8N6K7 520 aa21.26■□□□□ 0.99
HOXA9-203ENST00000465941 SLKQ9H2G2 1235 aaPredicted RBP21.26■□□□□ 0.99
HOXA9-203ENST00000465941 HTTP42858 3142 aa21.26■□□□□ 0.99
HOXA9-203ENST00000465941 hCG_1642624A0A1W2PR95 340 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 PTPDC1A2A3K4 754 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 OPLAHO14841 1288 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 PRPF3O43395 683 aaKnown RBP21.25■□□□□ 0.99
HOXA9-203ENST00000465941 INHAP05111 366 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 RPS6P62753 249 aaKnown RBP21.25■□□□□ 0.99
HOXA9-203ENST00000465941 UBXN2AP68543 259 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 CNTN2Q02246 1040 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 GHRHRQ02643 423 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 MFSD14CQ5VZR4 134 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 MAMDC4Q6UXC1 1216 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 MAP3K20Q9NYL2 800 aaKnown RBP21.25■□□□□ 0.99
HOXA9-203ENST00000465941 RBM27Q9P2N5 1060 aaKnown RBP21.25■□□□□ 0.99
HOXA9-203ENST00000465941 LIMCH1Q9UPQ0 1083 aa21.25■□□□□ 0.99
HOXA9-203ENST00000465941 CPLX1O14810 134 aa21.24■□□□□ 0.99
HOXA9-203ENST00000465941 SCRN1Q12765 414 aa21.24■□□□□ 0.99
HOXA9-203ENST00000465941 ME3Q16798 604 aa21.24■□□□□ 0.99
HOXA9-203ENST00000465941 MAP3K21Q5TCX8 1036 aa21.24■□□□□ 0.99
HOXA9-203ENST00000465941 CPLX2Q6PUV4 134 aaKnown RBP21.24■□□□□ 0.99
HOXA9-203ENST00000465941 TBC1D5Q92609 795 aa21.24■□□□□ 0.99
HOXA9-203ENST00000465941 FGD4Q96M96 766 aa21.24■□□□□ 0.99
HOXA9-203ENST00000465941 RNF26Q9BY78 433 aaPredicted RBP21.24■□□□□ 0.99
HOXA9-203ENST00000465941 SOWAHBA6NEL2 793 aa21.23■□□□□ 0.99
HOXA9-203ENST00000465941 hCG_1984214I3L0E3 225 aa21.23■□□□□ 0.99
HOXA9-203ENST00000465941 HSD17B4P51659 736 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms