RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 BUB1BO60566 1050 aaPredicted RBP4.92□□□□□ -1.62
SNX4-202ENST00000465505 SASH1O94885 1247 aa4.92□□□□□ -1.62
SNX4-202ENST00000465505 FBXW10Q5XX13 1052 aa4.92□□□□□ -1.62
SNX4-202ENST00000465505 ZC3H14Q6PJT7 736 aaKnown RBP4.92□□□□□ -1.62
SNX4-202ENST00000465505 FIBCD1Q8N539 461 aa4.92□□□□□ -1.62
SNX4-202ENST00000465505 NAT16Q8N8M0 369 aa4.92□□□□□ -1.62
SNX4-202ENST00000465505 NLGN2Q8NFZ4 835 aa4.92□□□□□ -1.62
SNX4-202ENST00000465505 RNF34Q969K3 372 aa4.92□□□□□ -1.62
SNX4-202ENST00000465505 PWWP2AQ96N64 755 aa4.92□□□□□ -1.62
SNX4-202ENST00000465505 A0A1W2PQ27 194 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 A0A1W2PQ64 194 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 A0A1W2PQC6 194 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 A0A1W2PQD8 194 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 CBFA2T2O43439 604 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 IGFBP6P24592 240 aaPredicted RBP4.91□□□□□ -1.62
SNX4-202ENST00000465505 PLEKHN1Q494U1 663 aaPredicted RBP4.91□□□□□ -1.62
SNX4-202ENST00000465505 PAQR3Q6TCH7 311 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 CYP2R1Q6VVX0 501 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 LSRQ86X29 649 aaPredicted RBP4.91□□□□□ -1.62
SNX4-202ENST00000465505 JAMLQ86YT9 394 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 LINC01356Q8N9X3 169 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
SNX4-202ENST00000465505 PDLIM7Q9NR12 457 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 FAM86C1Q9NVL1 165 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 RTEL1Q9NZ71 1219 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 SF3B6Q9Y3B4 125 aaKnown RBP4.91□□□□□ -1.62
SNX4-202ENST00000465505 HCFC2Q9Y5Z7 792 aa4.91□□□□□ -1.62
SNX4-202ENST00000465505 SRGAP3O43295 1099 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 CYBBP04839 570 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 DBHP09172 617 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 ITGA4P13612 1032 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 IFNGR1P15260 489 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 ZNF200P98182 395 aaPredicted RBP4.9□□□□□ -1.63
SNX4-202ENST00000465505 POU4F1Q01851 419 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 COL9A2Q14055 689 aaPredicted RBP4.9□□□□□ -1.63
SNX4-202ENST00000465505 NFIXQ14938 502 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 CXorf38Q8TB03 319 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 FEZF2Q8TBJ5 459 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 PTCHD1Q96NR3 888 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 NOL6Q9H6R4 1146 aaKnown RBP4.9□□□□□ -1.63
SNX4-202ENST00000465505 GINM1Q9NU53 330 aa4.9□□□□□ -1.63
SNX4-202ENST00000465505 DIS3Q9Y2L1 958 aaKnown RBP4.9□□□□□ -1.63
SNX4-202ENST00000465505 FFAR3O14843 346 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 TBC1D8O95759 1140 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 HMGB1P09429 215 aaKnown RBP4.89□□□□□ -1.63
SNX4-202ENST00000465505 FBLN1P23142 703 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 CORO7P57737 925 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 CAP1Q01518 475 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 PAK2Q13177 524 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 TCEAL1Q15170 157 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 TMCO4Q5TGY1 634 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 BICRALQ6AI39 1079 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 CCDC81Q6ZN84 652 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 ZDHHC14Q8IZN3 488 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 SYT8Q8NBV8 401 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 MCMBPQ9BTE3 642 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 LUC7LQ9NQ29 371 aaKnown RBP4.89□□□□□ -1.63
SNX4-202ENST00000465505 PLA2G2DQ9UNK4 145 aa4.89□□□□□ -1.63
SNX4-202ENST00000465505 SHROOM4Q9ULL8 1493 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 F8W031 263 aaPredicted RBP4.88□□□□□ -1.63
SNX4-202ENST00000465505 CD3EP07766 207 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 ATF2P15336 505 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 SYN1P17600 705 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 PFKLP17858 780 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 L1CAMP32004 1257 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 LIMS1P48059 325 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 SOX9P48436 509 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 GIPRP48546 466 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 PRR5P85299 388 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 TARBP2Q15633 366 aaKnown RBP4.88□□□□□ -1.63
SNX4-202ENST00000465505 METTL16Q86W50 562 aaKnown RBP4.88□□□□□ -1.63
SNX4-202ENST00000465505 ZNF654Q8IZM8 581 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 ZDHHC15Q96MV8 337 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 CRBNQ96SW2 442 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 HAUS7Q99871 368 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 KRTAP4-5Q9BYR2 181 aa4.88□□□□□ -1.63
SNX4-202ENST00000465505 A0A1W2PQH9 124 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 A0A1W2PQJ5 194 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 VAMP4O75379 141 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 RECKO95980 971 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 VAMP1P23763 118 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 TACR1P25103 407 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 FOXO4P98177 505 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 PPP2R5DQ14738 602 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 SKOR2Q2VWA4 1001 aaPredicted RBP4.87□□□□□ -1.63
SNX4-202ENST00000465505 GNPTABQ3T906 1256 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 RCSD1Q6JBY9 416 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 SP8Q8IXZ3 490 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 NLGN1Q8N2Q7 840 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 KLHL25Q9H0H3 589 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 WHRNQ9P202 907 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 EFR3BQ9Y2G0 817 aa4.87□□□□□ -1.63
SNX4-202ENST00000465505 ZC3H12DA2A288 527 aaKnown RBP4.86□□□□□ -1.63
SNX4-202ENST00000465505 SCAMP3O14828 347 aaKnown RBP4.86□□□□□ -1.63
SNX4-202ENST00000465505 AURKAO14965 403 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 PPP1R11O60927 126 aaPredicted RBP4.86□□□□□ -1.63
SNX4-202ENST00000465505 GLI4P10075 376 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 EIF6P56537 245 aaKnown RBP4.86□□□□□ -1.63
SNX4-202ENST00000465505 VWA3BQ502W6 1294 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms