RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 CHD1LQ86WJ1 897 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 PLEKHM2Q8IWE5 1019 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 VTI1AQ96AJ9 217 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 RANBP17Q9H2T7 1088 aaKnown RBP24.61■■□□□ 1.53
CSPG5-204ENST00000465441 CYP39A1Q9NYL5 469 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 CCPG1Q9ULG6 757 aa24.61■■□□□ 1.53
CSPG5-204ENST00000465441 CTAGE5O15320 804 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 CDK7P50613 346 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 EPHB4P54760 987 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 TNFAIP2Q03169 654 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 FAM161BQ96MY7 647 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 OSBPL3Q9H4L5 887 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 GPCPD1Q9NPB8 672 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 DDX49Q9Y6V7 483 aaKnown RBP24.6■■□□□ 1.53
CSPG5-204ENST00000465441 ASTN1O14525 1302 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 ZMYM6O95789 1325 aa24.6■■□□□ 1.53
CSPG5-204ENST00000465441 ICAM1P05362 532 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 NKX3-2P78367 333 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 AKNAD1Q5T1N1 836 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 SYDE2Q5VT97 1194 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 NSMFQ6X4W1 530 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 MFSD6Q6ZSS7 791 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 EXOC6Q8TAG9 804 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 TTC14Q96N46 770 aa24.59■■□□□ 1.53
CSPG5-204ENST00000465441 PURBQ96QR8 312 aaKnown RBP24.59■■□□□ 1.53
CSPG5-204ENST00000465441 FRMPD2Q68DX3 1309 aaPredicted RBP24.59■■□□□ 1.53
CSPG5-204ENST00000465441 NUCB1Q02818 461 aa24.58■■□□□ 1.53
CSPG5-204ENST00000465441 NOL8Q76FK4 1167 aaKnown RBP24.58■■□□□ 1.53
CSPG5-204ENST00000465441 GNEQ9Y223 722 aaKnown RBP24.58■■□□□ 1.53
CSPG5-204ENST00000465441 ARVCFO00192 962 aa24.57■■□□□ 1.52
CSPG5-204ENST00000465441 BEX3Q00994 111 aa24.57■■□□□ 1.52
CSPG5-204ENST00000465441 EEPD1Q7L9B9 569 aa24.57■■□□□ 1.52
CSPG5-204ENST00000465441 GUCD1Q96NT3 240 aa24.57■■□□□ 1.52
CSPG5-204ENST00000465441 PDGFCQ9NRA1 345 aa24.57■■□□□ 1.52
CSPG5-204ENST00000465441 COL6A3P12111 3177 aa24.56■■□□□ 1.52
CSPG5-204ENST00000465441 TIMP1P01033 207 aa24.56■■□□□ 1.52
CSPG5-204ENST00000465441 PDHBP11177 359 aa24.56■■□□□ 1.52
CSPG5-204ENST00000465441 PCP11498 1178 aaKnown RBP24.56■■□□□ 1.52
CSPG5-204ENST00000465441 MFAP1P55081 439 aaKnown RBP24.56■■□□□ 1.52
CSPG5-204ENST00000465441 BAATQ14032 418 aaPredicted RBP24.56■■□□□ 1.52
CSPG5-204ENST00000465441 ZNF697Q5TEC3 545 aa24.56■■□□□ 1.52
CSPG5-204ENST00000465441 IQSEC1Q6DN90 963 aa24.56■■□□□ 1.52
CSPG5-204ENST00000465441 TAPT1Q6NXT6 567 aa24.56■■□□□ 1.52
CSPG5-204ENST00000465441 TBC1D10CQ8IV04 446 aa24.56■■□□□ 1.52
CSPG5-204ENST00000465441 A0A0U1RQG5 324 aaPredicted RBP24.55■■□□□ 1.52
CSPG5-204ENST00000465441 ZNF213O14771 459 aa24.55■■□□□ 1.52
CSPG5-204ENST00000465441 DYNC1LI2O43237 492 aaPredicted RBP24.55■■□□□ 1.52
CSPG5-204ENST00000465441 SMPD1P17405 629 aa24.55■■□□□ 1.52
CSPG5-204ENST00000465441 PTGS1P23219 599 aa24.55■■□□□ 1.52
CSPG5-204ENST00000465441 FPGSQ05932 587 aa24.55■■□□□ 1.52
CSPG5-204ENST00000465441 TMEM63BQ5T3F8 832 aa24.55■■□□□ 1.52
CSPG5-204ENST00000465441 TBX21Q9UL17 535 aa24.55■■□□□ 1.52
CSPG5-204ENST00000465441 MROH7Q68CQ1 1323 aa24.55■■□□□ 1.52
CSPG5-204ENST00000465441 SMAD3P84022 425 aaKnown RBP24.54■■□□□ 1.52
CSPG5-204ENST00000465441 CWC27Q6UX04 472 aaKnown RBP24.54■■□□□ 1.52
CSPG5-204ENST00000465441 FBXO16Q8IX29 292 aaPredicted RBP24.54■■□□□ 1.52
CSPG5-204ENST00000465441 MORC4Q8TE76 937 aa24.54■■□□□ 1.52
CSPG5-204ENST00000465441 ZKSCAN3Q9BRR0 538 aa24.54■■□□□ 1.52
CSPG5-204ENST00000465441 SEMA6BQ9H3T3 888 aa24.54■■□□□ 1.52
CSPG5-204ENST00000465441 RNF41Q9H4P4 317 aaPredicted RBP24.54■■□□□ 1.52
CSPG5-204ENST00000465441 NFIBO00712 420 aa24.53■■□□□ 1.52
CSPG5-204ENST00000465441 SNHG28P0DPA3 235 aa24.53■■□□□ 1.52
CSPG5-204ENST00000465441 ZNF543Q08ER8 600 aa24.53■■□□□ 1.52
CSPG5-204ENST00000465441 KIAA1211Q6ZU35 1233 aa24.53■■□□□ 1.52
CSPG5-204ENST00000465441 TLK2Q86UE8 772 aa24.53■■□□□ 1.52
CSPG5-204ENST00000465441 ESR2Q92731 530 aa24.53■■□□□ 1.52
CSPG5-204ENST00000465441 RNPC3Q96LT9 517 aaKnown RBP24.53■■□□□ 1.52
CSPG5-204ENST00000465441 AP5M1Q9H0R1 490 aa24.53■■□□□ 1.52
CSPG5-204ENST00000465441 DLL1O00548 723 aa24.52■■□□□ 1.52
CSPG5-204ENST00000465441 MFSD5Q6N075 450 aa24.52■■□□□ 1.52
CSPG5-204ENST00000465441 CXCL17Q6UXB2 119 aa24.52■■□□□ 1.52
CSPG5-204ENST00000465441 FAM126BQ8IXS8 530 aa24.52■■□□□ 1.52
CSPG5-204ENST00000465441 CLEC4DQ8WXI8 215 aa24.52■■□□□ 1.52
CSPG5-204ENST00000465441 VTA1Q9NP79 307 aa24.52■■□□□ 1.52
CSPG5-204ENST00000465441 Q9Y3F1 56 aa24.52■■□□□ 1.52
CSPG5-204ENST00000465441 PTPDC1A2A3K4 754 aa24.51■■□□□ 1.51
CSPG5-204ENST00000465441 ALDH5A1P51649 535 aaPredicted RBP24.51■■□□□ 1.51
CSPG5-204ENST00000465441 FSCN1Q16658 493 aaKnown RBP24.51■■□□□ 1.51
CSPG5-204ENST00000465441 DGKHQ86XP1 1220 aa24.51■■□□□ 1.51
CSPG5-204ENST00000465441 SLC43A3Q8NBI5 491 aa24.51■■□□□ 1.51
CSPG5-204ENST00000465441 ADD3Q9UEY8 706 aaKnown RBP24.51■■□□□ 1.51
CSPG5-204ENST00000465441 NEDD4P46934 1319 aa24.51■■□□□ 1.51
CSPG5-204ENST00000465441 TLR3O15455 904 aaKnown RBP24.5■■□□□ 1.51
CSPG5-204ENST00000465441 CD4P01730 458 aa24.5■■□□□ 1.51
CSPG5-204ENST00000465441 CDX2Q99626 313 aaPredicted RBP24.5■■□□□ 1.51
CSPG5-204ENST00000465441 DIAPH3Q9NSV4 1193 aa24.5■■□□□ 1.51
CSPG5-204ENST00000465441 ZEB2O60315 1214 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 CABYRO75952 493 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 GOLGA8HP0CJ92 632 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 CALML3P27482 149 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 C16orf59Q7L2K0 433 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.49■■□□□ 1.51
CSPG5-204ENST00000465441 UBA5Q9GZZ9 404 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 TTYH1Q9H313 450 aaPredicted RBP24.49■■□□□ 1.51
CSPG5-204ENST00000465441 PNMA2Q9UL42 364 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 GRIN2DO15399 1336 aa24.49■■□□□ 1.51
CSPG5-204ENST00000465441 HIP1O00291 1037 aa24.48■■□□□ 1.51
CSPG5-204ENST00000465441 KDM4AO75164 1064 aa24.48■■□□□ 1.51
CSPG5-204ENST00000465441 ITGA7Q13683 1181 aa24.48■■□□□ 1.51
CSPG5-204ENST00000465441 SLC30A10Q6XR72 485 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms