RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
MRPL55-225ENST00000465268 TTC22Q5TAA0 569 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 NSMFQ6X4W1 530 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 CLEC4DQ8WXI8 215 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 ESR2Q92731 530 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 BADQ92934 168 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 TTC14Q96N46 770 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 DSCC1Q9BVC3 393 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 PCP11498 1178 aaKnown RBP17.53■□□□□ 0.4
MRPL55-225ENST00000465268 BAATQ14032 418 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-225ENST00000465268 Q7L0L9 218 aa17.53■□□□□ 0.4
MRPL55-225ENST00000465268 EEPD1Q7L9B9 569 aa17.53■□□□□ 0.4
MRPL55-225ENST00000465268 LBHD1Q9BQE6 289 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-225ENST00000465268 TSEN34Q9BSV6 310 aaKnown RBP17.53■□□□□ 0.4
MRPL55-225ENST00000465268 UBA5Q9GZZ9 404 aa17.53■□□□□ 0.4
MRPL55-225ENST00000465268 UPF3AQ9H1J1 476 aaKnown RBP17.53■□□□□ 0.4
MRPL55-225ENST00000465268 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-225ENST00000465268 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
MRPL55-225ENST00000465268 LAMA2P24043 3122 aaKnown RBP17.52■□□□□ 0.4
MRPL55-225ENST00000465268 HIP1O00291 1037 aa17.52■□□□□ 0.4
MRPL55-225ENST00000465268 PQBP1O60828 265 aaKnown RBP17.52■□□□□ 0.4
MRPL55-225ENST00000465268 C6orf222P0C671 652 aaPredicted RBP17.52■□□□□ 0.4
MRPL55-225ENST00000465268 GJA9P57773 515 aa17.52■□□□□ 0.4
MRPL55-225ENST00000465268 BEX3Q00994 111 aa17.52■□□□□ 0.4
MRPL55-225ENST00000465268 C9orf50Q5SZB4 431 aa17.52■□□□□ 0.4
MRPL55-225ENST00000465268 TAPT1Q6NXT6 567 aa17.52■□□□□ 0.4
MRPL55-225ENST00000465268 FBXO16Q8IX29 292 aaPredicted RBP17.52■□□□□ 0.4
MRPL55-225ENST00000465268 ZSWIM5Q9P217 1185 aa17.52■□□□□ 0.4
MRPL55-225ENST00000465268 PRKAG2Q9UGJ0 569 aa17.52■□□□□ 0.4
MRPL55-225ENST00000465268 ASGR1P07306 291 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 SMPD1P17405 629 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 CST5P28325 142 aaPredicted RBP17.51■□□□□ 0.39
MRPL55-225ENST00000465268 EPHB4P54760 987 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 SHHQ15465 462 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 SLC30A10Q6XR72 485 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 DGKHQ86XP1 1220 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 ENAHQ8N8S7 591 aaPredicted RBP17.51■□□□□ 0.39
MRPL55-225ENST00000465268 STARD7Q9NQZ5 370 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 GNEQ9Y223 722 aaKnown RBP17.51■□□□□ 0.39
MRPL55-225ENST00000465268 TAF6LQ9Y6J9 622 aa17.51■□□□□ 0.39
MRPL55-225ENST00000465268 MOXD2PA6NHM9 499 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 ASB14A6NK59 587 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 CLTBP09497 229 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 TNFAIP2Q03169 654 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 PTH1RQ03431 593 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 PNMA1Q8ND90 353 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 MORC4Q8TE76 937 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 ANKS1AQ92625 1134 aa17.5■□□□□ 0.39
MRPL55-225ENST00000465268 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
MRPL55-225ENST00000465268 CHMLP26374 656 aa17.49■□□□□ 0.39
MRPL55-225ENST00000465268 CDK7P50613 346 aa17.49■□□□□ 0.39
MRPL55-225ENST00000465268 NKX3-2P78367 333 aa17.49■□□□□ 0.39
MRPL55-225ENST00000465268 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
MRPL55-225ENST00000465268 GNASQ5JWF2 1037 aa17.49■□□□□ 0.39
MRPL55-225ENST00000465268 CYB5R4Q7L1T6 521 aa17.49■□□□□ 0.39
MRPL55-225ENST00000465268 ANKRD33Q7Z3H0 272 aa17.49■□□□□ 0.39
MRPL55-225ENST00000465268 TBC1D5Q92609 795 aa17.49■□□□□ 0.39
MRPL55-225ENST00000465268 COL6A3P12111 3177 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 TNKSO95271 1327 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 KIAA0355O15063 1070 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 CALML3P27482 149 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 ALDH5A1P51649 535 aaPredicted RBP17.48■□□□□ 0.39
MRPL55-225ENST00000465268 NOL8Q76FK4 1167 aaKnown RBP17.48■□□□□ 0.39
MRPL55-225ENST00000465268 DEFB123Q8N688 67 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 CTNNA3Q9UI47 895 aa17.48■□□□□ 0.39
MRPL55-225ENST00000465268 DYNC1LI2O43237 492 aaPredicted RBP17.47■□□□□ 0.39
MRPL55-225ENST00000465268 USH1GQ495M9 461 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 CXCL17Q6UXB2 119 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 TLK2Q86UE8 772 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 IQCA1Q86XH1 822 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 KAT14Q9H8E8 782 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 TMEM39AQ9NV64 488 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 WDR19Q8NEZ3 1342 aa17.47■□□□□ 0.39
MRPL55-225ENST00000465268 CYP21A2P08686 494 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 RPS6P62753 249 aaKnown RBP17.46■□□□□ 0.39
MRPL55-225ENST00000465268 SEC23AQ15436 765 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 GPATCH4Q5T3I0 446 aaKnown RBP17.46■□□□□ 0.39
MRPL55-225ENST00000465268 GPR153Q6NV75 609 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 RNF207Q6ZRF8 634 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 SKAP1Q86WV1 359 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 STAG2Q8N3U4 1231 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 PCSK9Q8NBP7 692 aaKnown RBP17.46■□□□□ 0.39
MRPL55-225ENST00000465268 GLT1D1Q96MS3 346 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 TOX2Q96NM4 488 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 SENP2Q9HC62 589 aa17.46■□□□□ 0.39
MRPL55-225ENST00000465268 ELP1O95163 1332 aa17.46■□□□□ 0.38
MRPL55-225ENST00000465268 LTBP2Q14767 1821 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 ARVCFO00192 962 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
MRPL55-225ENST00000465268 SLC35G1Q2M3R5 365 aa17.45■□□□□ 0.38
MRPL55-225ENST00000465268 IQSEC1Q6DN90 963 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms