RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 APPP05067 770 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 ACRP10323 421 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 SMPD1P17405 629 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 TNFAIP2Q03169 654 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 PDE4BQ07343 736 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 TKFCQ3LXA3 575 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 MUM1L1Q5H9M0 696 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 TAPT1Q6NXT6 567 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 PSRC1Q6PGN9 363 aaPredicted RBP13□□□□□ -0.33
COL11A1-207ENST00000465209 ZNF365Q70YC5 407 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 TLK2Q86UE8 772 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 HERVK_113Q902F9 699 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 PPP1R12CQ9BZL4 782 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 CYP39A1Q9NYL5 469 aa13□□□□□ -0.33
COL11A1-207ENST00000465209 CXXC1Q9P0U4 656 aaPredicted RBP13□□□□□ -0.33
COL11A1-207ENST00000465209 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
COL11A1-207ENST00000465209 NMT2O60551 498 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 MCCP23508 829 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 CYP2C18P33260 490 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 SLC1A4P43007 532 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 ADGRE1Q14246 886 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 CXCL17Q6UXB2 119 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 CCDC129Q6ZRS4 1044 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 KCTD1Q719H9 257 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 FBXO16Q8IX29 292 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-207ENST00000465209 TMEM199Q8N511 208 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 CHURC1Q8WUH1 139 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 TRERF1Q96PN7 1200 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 PURBQ96QR8 312 aaKnown RBP12.99□□□□□ -0.33
COL11A1-207ENST00000465209 NACAP1Q9BZK3 213 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 NAPBQ9H115 298 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 WNT8AQ9H1J5 351 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 IL23AQ9NPF7 189 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 INCENPQ9NQS7 918 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 PRDM6Q9NQX0 595 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 PDGFCQ9NRA1 345 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 PCDHB15Q9Y5E8 787 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 NCOR1O75376 2440 aa12.99□□□□□ -0.33
COL11A1-207ENST00000465209 ASB14A6NK59 587 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 TLR3O15455 904 aaKnown RBP12.98□□□□□ -0.33
COL11A1-207ENST00000465209 B4GALT4O60513 344 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 FGRP09769 529 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 SNAP25P60880 206 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 FSCN1Q16658 493 aaKnown RBP12.98□□□□□ -0.33
COL11A1-207ENST00000465209 VPS53Q5VIR6 699 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 RCSD1Q6JBY9 416 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 NOC4LQ9BVI4 516 aaKnown RBP12.98□□□□□ -0.33
COL11A1-207ENST00000465209 RANBP17Q9H2T7 1088 aaKnown RBP12.98□□□□□ -0.33
COL11A1-207ENST00000465209 ANAPC4Q9UJX5 808 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 YBX2Q9Y2T7 364 aaKnown RBP12.98□□□□□ -0.33
COL11A1-207ENST00000465209 Q9Y3F1 56 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
COL11A1-207ENST00000465209 ERC2O15083 957 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 CABYRO75952 493 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 ALAS1P13196 640 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 ITGA7Q13683 1181 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
COL11A1-207ENST00000465209 TJAP1Q5JTD0 557 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 CCDC174Q6PII3 467 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
COL11A1-207ENST00000465209 VTI1AQ96AJ9 217 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 CHMP4CQ96CF2 233 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 FSD1Q9BTV5 496 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 PRDM12Q9H4Q4 367 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 STX8Q9UNK0 236 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 LAMA4Q16363 1823 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 TET1Q8NFU7 2136 aa12.97□□□□□ -0.33
COL11A1-207ENST00000465209 ORC4O43929 436 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 ICAM1P05362 532 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.33
COL11A1-207ENST00000465209 MX1P20591 662 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 PSMC6P62333 389 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 IQSEC1Q6DN90 963 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 SEZ6LQ9BYH1 1024 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 TRPV6Q9H1D0 765 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 VTA1Q9NP79 307 aa12.96□□□□□ -0.33
COL11A1-207ENST00000465209 RBM47A0AV96 593 aaKnown RBP12.95□□□□□ -0.34
COL11A1-207ENST00000465209 TSPY2A6NKD2 308 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 NFIBO00712 420 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 DYNC1LI2O43237 492 aaPredicted RBP12.95□□□□□ -0.34
COL11A1-207ENST00000465209 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
COL11A1-207ENST00000465209 RAB30Q15771 203 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 TTBK2Q6IQ55 1244 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 EEPD1Q7L9B9 569 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 DCAF4Q8WV16 495 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
COL11A1-207ENST00000465209 NKX2-4Q9H2Z4 354 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 CCPG1Q9ULG6 757 aa12.95□□□□□ -0.34
COL11A1-207ENST00000465209 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 LOC102724159A0A0B4J2E5 919 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 ALDH5A1P51649 535 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-207ENST00000465209 CCL23P55773 120 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 PURAQ00577 322 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms