RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-209	ENST00000464576	PRR12	Q9ULL5	1215 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	CDH23	Q9H251	3354 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	CSF2RA	P15509	400 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	CDK7	P50613	346 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	SNAP25	P60880	206 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	BRDT	Q58F21	947 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	IQSEC1	Q6DN90	963 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	CXCL17	Q6UXB2	119 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	KIAA1211	Q6ZU35	1233 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	EEPD1	Q7L9B9	569 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	DCAF4	Q8WV16	495 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	SEZ6L	Q9BYH1	1024 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	ZNF576	Q9H609	170 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	GPHN	Q9NQX3	736 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	TBX21	Q9UL17	535 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	PNMA2	Q9UL42	364 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	PCDHB15	Q9Y5E8	787 aa		11.14	□□□□□ -0.63
PTPN18-209	ENST00000464576	VCAN	P13611	3396 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	PTPDC1	A2A3K4	754 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	SOWAHB	A6NEL2	793 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	TRIM6-TRIM34	B2RNG4	842 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576		B4DLN1	442 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	NMT2	O60551	498 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	FGB	P02675	491 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	ICAM1	P05362	532 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	ACR	P10323	421 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	MRPL12	P52815	198 aa	Known RBP	11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	IRX5	P78411	483 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	ITGA7	Q13683	1181 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	FAM126B	Q8IXS8	530 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	RPUSD2	Q8IZ73	545 aa	Known RBP	11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	HIPK3	Q9H422	1215 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	VTA1	Q9NP79	307 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	HELLS	Q9NRZ9	838 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	CYP39A1	Q9NYL5	469 aa		11.13	□□□□□ -0.63
PTPN18-209	ENST00000464576	ZNF536	O15090	1300 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	ADCY6	O43306	1168 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	TOP1	P11387	765 aa	Known RBP	11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	CYP2C18	P33260	490 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	MFAP1	P55081	439 aa	Known RBP	11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	GRIN2C	Q14957	1233 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	RAB30	Q15771	203 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	MCMDC2	Q4G0Z9	681 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	TMEM240	Q5SV17	173 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	SYDE2	Q5VT97	1194 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	ZNF365	Q70YC5	407 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	FBXO16	Q8IX29	292 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	PPM1E	Q8WY54	764 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	FGD4	Q96M96	766 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	SLC28A3	Q9HAS3	691 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	GPCPD1	Q9NPB8	672 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	IL23A	Q9NPF7	189 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	INCENP	Q9NQS7	918 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	IL17RB	Q9NRM6	502 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	ANAPC4	Q9UJX5	808 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576		Q9Y3F1	56 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	TTC28	Q96AY4	2481 aa		11.12	□□□□□ -0.63
PTPN18-209	ENST00000464576	RAD50	Q92878	1312 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	ORC4	O43929	436 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	SUPT20HL2	P0C7V6	817 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	SMPD1	P17405	629 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	CALML3	P27482	149 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	SLC16A2	P36021	539 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	CPT1A	P50416	773 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	PDE4D	Q08499	809 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	BAAT	Q14032	418 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	MUM1L1	Q5H9M0	696 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	MFSD6	Q6ZSS7	791 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	IL27	Q8NEV9	243 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	RILPL2	Q969X0	211 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	WDR11	Q9BZH6	1224 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	KATNBL1	Q9H079	304 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	PDGFC	Q9NRA1	345 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	POLR3E	Q9NVU0	708 aa		11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	GNE	Q9Y223	722 aa	Known RBP	11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
PTPN18-209	ENST00000464576	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	ZBBX	A8MT70	800 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	GRXCR1	A8MXD5	290 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	FGA	P02671	866 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	MYL3	P08590	195 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	IGFBP4	P22692	258 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	PDE1A	P54750	535 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	CCL23	P55773	120 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	ALX1	Q15699	326 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	FAM47C	Q5HY64	1035 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	VPS53	Q5VIR6	699 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	RNF207	Q6ZRF8	634 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	OTOP2	Q7RTS6	562 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	TICAM2	Q86XR7	235 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	TMEM47	Q9BQJ4	181 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	PBX4	Q9BYU1	374 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	TRPV6	Q9H1D0	765 aa		11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	RANBP17	Q9H2T7	1088 aa	Known RBP	11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	RNF41	Q9H4P4	317 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN18-209	ENST00000464576	SLC4A7	Q9Y6M7	1214 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms