RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 QRICH1Q2TAL8 776 aa19.82■□□□□ 0.76
VPS52-215ENST00000464425 RAB11FIP4Q86YS3 637 aa19.82■□□□□ 0.76
VPS52-215ENST00000464425 CLEC4DQ8WXI8 215 aa19.82■□□□□ 0.76
VPS52-215ENST00000464425 JAKMIP1Q96N16 626 aaKnown RBP19.82■□□□□ 0.76
VPS52-215ENST00000464425 CYP39A1Q9NYL5 469 aa19.82■□□□□ 0.76
VPS52-215ENST00000464425 PNMA2Q9UL42 364 aa19.82■□□□□ 0.76
VPS52-215ENST00000464425 PFASO15067 1338 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 WDR19Q8NEZ3 1342 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 DDAH1O94760 285 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 RXRAP19793 462 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 BAATQ14032 418 aaPredicted RBP19.81■□□□□ 0.76
VPS52-215ENST00000464425 SLC35G1Q2M3R5 365 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 LHX8Q68G74 356 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 CCDC144CPQ8IYA2 1237 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 FAM133AQ8N9E0 248 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 FGD4Q96M96 766 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 PURBQ96QR8 312 aaKnown RBP19.81■□□□□ 0.76
VPS52-215ENST00000464425 SLC12A7Q9Y666 1083 aa19.81■□□□□ 0.76
VPS52-215ENST00000464425 PTPDC1A2A3K4 754 aa19.8■□□□□ 0.76
VPS52-215ENST00000464425 SOWAHBA6NEL2 793 aa19.8■□□□□ 0.76
VPS52-215ENST00000464425 HMGB1P09429 215 aaKnown RBP19.8■□□□□ 0.76
VPS52-215ENST00000464425 ANO1Q5XXA6 986 aa19.8■□□□□ 0.76
VPS52-215ENST00000464425 ZNF467Q7Z7K2 595 aaPredicted RBP19.8■□□□□ 0.76
VPS52-215ENST00000464425 FBXO11Q86XK2 927 aa19.8■□□□□ 0.76
VPS52-215ENST00000464425 HOMER1Q86YM7 354 aa19.8■□□□□ 0.76
VPS52-215ENST00000464425 CTCFLQ8NI51 663 aaPredicted RBP19.8■□□□□ 0.76
VPS52-215ENST00000464425 PIBF1Q8WXW3 757 aa19.8■□□□□ 0.76
VPS52-215ENST00000464425 BACH2Q9BYV9 841 aa19.8■□□□□ 0.76
VPS52-215ENST00000464425 DDX20Q9UHI6 824 aaKnown RBP19.8■□□□□ 0.76
VPS52-215ENST00000464425 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
VPS52-215ENST00000464425 SNAI1O95863 264 aaPredicted RBP19.79■□□□□ 0.76
VPS52-215ENST00000464425 CALML3P27482 149 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 KIF5BP33176 963 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 MAMDC4Q6UXC1 1216 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 RNF207Q6ZRF8 634 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 MSL3Q8N5Y2 521 aaKnown RBP19.79■□□□□ 0.76
VPS52-215ENST00000464425 PIGSQ96S52 555 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 RIOX1Q9H6W3 641 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 OGDHLQ9ULD0 1010 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 CNPY2Q9Y2B0 182 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 PLXNA1Q9UIW2 1896 aa19.79■□□□□ 0.76
VPS52-215ENST00000464425 ZBTB5O15062 677 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 CYTH3O43739 400 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 ANAPC15P60006 121 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 FGD1P98174 961 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 BLOC1S2Q6QNY1 142 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 SLC30A10Q6XR72 485 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 SGMS1Q86VZ5 419 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 MTMR8Q96EF0 704 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 IL17RAQ96F46 866 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 MAP3K14Q99558 947 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.78■□□□□ 0.76
VPS52-215ENST00000464425 BRPF3Q9ULD4 1205 aa19.78■□□□□ 0.76
VPS52-215ENST00000464425 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
VPS52-215ENST00000464425 BAZ2BQ9UIF8 2168 aaKnown RBP19.78■□□□□ 0.76
VPS52-215ENST00000464425 ABCB11O95342 1321 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 SYNGAP1Q96PV0 1343 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 SEPT4O43236 478 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 PPP1R11O60927 126 aaPredicted RBP19.77■□□□□ 0.76
VPS52-215ENST00000464425 ZNF865P0CJ78 1059 aaPredicted RBP19.77■□□□□ 0.76
VPS52-215ENST00000464425 CALM1P0DP23 149 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 CALM2P0DP24 149 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 CALM3P0DP25 149 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 ARMCX2Q7L311 632 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 UBE2Q1Q7Z7E8 422 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 MICU3Q86XE3 530 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 CMTR1Q8N1G2 835 aaKnown RBP19.77■□□□□ 0.76
VPS52-215ENST00000464425 DIS3LQ8TF46 1054 aaKnown RBP19.77■□□□□ 0.76
VPS52-215ENST00000464425 TBC1D5Q92609 795 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 PAWRQ96IZ0 340 aaKnown RBP19.77■□□□□ 0.76
VPS52-215ENST00000464425 AMNQ9BXJ7 453 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 NRBP1Q9UHY1 535 aa19.77■□□□□ 0.76
VPS52-215ENST00000464425 ZHX1Q9UKY1 873 aaPredicted RBP19.77■□□□□ 0.76
VPS52-215ENST00000464425 MRPL11Q9Y3B7 192 aaKnown RBP19.77■□□□□ 0.76
VPS52-215ENST00000464425 ASTN1O14525 1302 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 MSCO60682 206 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 PLEKHA8P1O95397 391 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 CAPN2P17655 700 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 CASTP20810 708 aaKnown RBP19.76■□□□□ 0.75
VPS52-215ENST00000464425 PSMA5P28066 241 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 RPS6P62753 249 aaKnown RBP19.76■□□□□ 0.75
VPS52-215ENST00000464425 Q6ZUG5 572 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 FANCBQ8NB91 859 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 UPF2Q9HAU5 1272 aaKnown RBP19.76■□□□□ 0.75
VPS52-215ENST00000464425 NAP1L2Q9ULW6 460 aaPredicted RBP19.76■□□□□ 0.75
VPS52-215ENST00000464425 PCDHA1Q9Y5I3 950 aa19.76■□□□□ 0.75
VPS52-215ENST00000464425 PNMA6FA0A0J9YX94 578 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 ASB14A6NK59 587 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 MYCNP04198 464 aaPredicted RBP19.75■□□□□ 0.75
VPS52-215ENST00000464425 RPS6KB1P23443 525 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 GNAQP50148 359 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 MNX1P50219 401 aaPredicted RBP19.75■□□□□ 0.75
VPS52-215ENST00000464425 ACVR2BQ13705 512 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 APOA5Q6Q788 366 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 CCDC82Q8N4S0 544 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 SRBD1Q8N5C6 995 aaKnown RBP19.75■□□□□ 0.75
VPS52-215ENST00000464425 ANKLE1Q8NAG6 615 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 LZTS2Q9BRK4 669 aa19.75■□□□□ 0.75
VPS52-215ENST00000464425 TM6SF1Q9BZW5 370 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms