RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PAK2Q13177 524 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 MGARPQ8TDB4 240 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 CABS1Q96KC9 395 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 USP40Q9NVE5 1235 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 RASAL2Q9UJF2 1139 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 ADAM21Q9UKJ8 722 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 CAMSAP1Q5T5Y3 1602 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 MEIS1O00470 390 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
HPS4-208ENST00000464362 PPFIA1Q13136 1202 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 CALCOCO2Q13137 446 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 RABL6Q3YEC7 729 aaPredicted RBP10.03□□□□□ -0.8
HPS4-208ENST00000464362 KCTD1Q719H9 257 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 PNMA8AQ86V59 439 aaPredicted RBP10.03□□□□□ -0.8
HPS4-208ENST00000464362 KRT12Q99456 494 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 PSTPIP2Q9H939 334 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 ADAM9Q13443 819 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 BIRC3Q13489 604 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 CCDC26Q8TAB7 109 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 ARMCX3Q9UH62 379 aaPredicted RBP10.03□□□□□ -0.8
HPS4-208ENST00000464362 HYOU1Q9Y4L1 999 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 ADGRB1O14514 1584 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 MROH7-TTC4A0A0A0MT08 1334 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 USP42Q9H9J4 1324 aaKnown RBP10.03□□□□□ -0.8
HPS4-208ENST00000464362 BACH1O14867 736 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 DDAH1O94760 285 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
HPS4-208ENST00000464362 HAUS3Q68CZ6 603 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 CC2D1AQ6P1N0 951 aaPredicted RBP10.03□□□□□ -0.8
HPS4-208ENST00000464362 P2RX5Q93086 422 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 HPS3Q969F9 1004 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 PLVAPQ9BX97 442 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 OVOS2A0A0J9YW53 1432 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 OVOS2Q6IE36 1432 aa10.03□□□□□ -0.8
HPS4-208ENST00000464362 PPP1R2P41236 205 aa10.02□□□□□ -0.8
HPS4-208ENST00000464362 PRCPP42785 496 aa10.02□□□□□ -0.8
HPS4-208ENST00000464362 RFX5P48382 616 aaPredicted RBP10.02□□□□□ -0.8
HPS4-208ENST00000464362 UBE2SQ16763 222 aa10.02□□□□□ -0.8
HPS4-208ENST00000464362 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.8
HPS4-208ENST00000464362 CERS3Q8IU89 383 aa10.02□□□□□ -0.8
HPS4-208ENST00000464362 SYNCQ9H7C4 482 aa10.02□□□□□ -0.8
HPS4-208ENST00000464362 PANK4Q9NVE7 773 aa10.02□□□□□ -0.8
HPS4-208ENST00000464362 NEXMIFQ5QGS0 1516 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 SORBS3O60504 671 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 XRCC5P13010 732 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 CTNNA1P35221 906 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 ZNF658Q5TYW1 1059 aaPredicted RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 CELF1Q92879 486 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 FUCA2Q9BTY2 467 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 EPB41L5Q9HCM4 733 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 ATP8A2Q9NTI2 1148 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 MTRF1LQ9UGC7 380 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 PCDHA4Q9UN74 947 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 ARHGEF35A5YM69 484 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 FLOT1O75955 427 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 KRT26Q7Z3Y9 468 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 FBF1Q8TES7 1133 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 LARP4BQ92615 738 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 ADAMTS1Q9UHI8 967 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 TFR2Q9UP52 801 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 ADGRG1Q9Y653 693 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 KRIT1O00522 736 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 CLIC2O15247 247 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 PRPF3O43395 683 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 MYCLP12524 364 aaPredicted RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 TCP11X2Q5H9J9 407 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 CHP1Q99653 195 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 CAPS2Q9BXY5 557 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 ASIC3Q9UHC3 531 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 DDX25Q9UHL0 483 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 USTQ9Y2C2 406 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 THRAP3Q9Y2W1 955 aaKnown RBP10.02□□□□□ -0.81
HPS4-208ENST00000464362 PCDHA1Q9Y5I3 950 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 CAPN7Q9Y6W3 813 aa10.02□□□□□ -0.81
HPS4-208ENST00000464362 ANKARQ7Z5J8 1434 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 TTC26A0AVF1 554 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 CLGNO14967 610 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 ANKS4BQ8N8V4 417 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 NHEJ1Q9H9Q4 299 aaPredicted RBP10.01□□□□□ -0.81
HPS4-208ENST00000464362 UTP11Q9Y3A2 253 aaKnown RBP10.01□□□□□ -0.81
HPS4-208ENST00000464362 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
HPS4-208ENST00000464362 POTEMA6NI47 508 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 TCP1P17987 556 aaKnown RBP10.01□□□□□ -0.81
HPS4-208ENST00000464362 NF2P35240 595 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 ACTN2P35609 894 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 SNAP25P60880 206 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 NSMFQ6X4W1 530 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 CCDC105Q8IYK2 499 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 ENGASEQ8NFI3 743 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 ISCA1Q9BUE6 129 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 SUGCTQ9HAC7 445 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 TRIM10Q9UDY6 481 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 ESYT3A0FGR9 886 aa10.01□□□□□ -0.81
HPS4-208ENST00000464362 HEXIM1O94992 359 aaKnown RBP10.01□□□□□ -0.81
HPS4-208ENST00000464362 ZSCAN20P17040 1043 aaPredicted RBP10.01□□□□□ -0.81
HPS4-208ENST00000464362 UAP1Q16222 522 aaPredicted RBP10.01□□□□□ -0.81
HPS4-208ENST00000464362 CAPN12Q6ZSI9 719 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms