RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NT5C2P49902 561 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 CDR1P51861 262 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 RBL2Q08999 1139 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 DRP2Q13474 957 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 PLCB4Q15147 1175 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 UBE3CQ15386 1083 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 EMBQ6PCB8 327 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 LMBR1LQ6UX01 489 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 LRRC31Q6UY01 552 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 TAX1BP1Q86VP1 789 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 TEX2Q8IWB9 1127 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 FAM114A1Q8IWE2 563 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 CCDC170Q8IYT3 715 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 IFNL2Q8IZJ0 200 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 SLC35F6Q8N357 371 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 C3orf20Q8ND61 904 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 SYTL4Q96C24 671 aaPredicted RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 NUP88Q99567 741 aaPredicted RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 RHOXF2Q9BQY4 288 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 NACAP1Q9BZK3 213 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 MRPL44Q9H9J2 332 aaKnown RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 LUC7LQ9NQ29 371 aaKnown RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 INTS13Q9NVM9 706 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 GOLGA6AQ9NYA3 693 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 MAGEC2Q9UBF1 373 aaPredicted RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 RNF14Q9UBS8 474 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 RWDD2AQ9UIY3 292 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 FBXO2Q9UK22 296 aaPredicted RBP8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 FAM184BQ9ULE4 1060 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 ECM29Q5VYK3 1845 aa8.06□□□□□ -1.12
CLSTN1-204ENST00000464286 RGPD2P0DJD1 1756 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 A0A087WWV3 80 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 GOLGA6L7A0A1B0GV03 622 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 SOWAHDA6NJG2 315 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 M0R2C6 588 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 ZEB2O60315 1214 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 MAN1A2O60476 641 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 USO1O60763 962 aaKnown RBP8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 DTNBO60941 627 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 MYL6BP14649 208 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 PRLRP16471 622 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 INPP5BP32019 993 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 GMPRP36959 345 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 TRAPPC10P48553 1259 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 VSNL1P62760 191 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 CCDC57Q2TAC2 916 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 GLE1Q53GS7 698 aaKnown RBP8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 TMEM67Q5HYA8 995 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 EPHA10Q5JZY3 1008 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 PAPD7Q5XG87 772 aaKnown RBP8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 ISM2Q6H9L7 571 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 APOA5Q6Q788 366 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 RAD9BQ6WBX8 426 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 YTHDF3Q7Z739 585 aaKnown RBP8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 KIAA1328Q86T90 577 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 DZIP3Q86Y13 1208 aaKnown RBP8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 MICALL1Q8N3F8 863 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 ARFGAP2Q8N6H7 521 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 OR8K1Q8NGG5 319 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 KLHDC4Q8TBB5 520 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 IRF7Q92985 503 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 DCAF5Q96JK2 942 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 PNKPQ96T60 521 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 DESI2Q9BSY9 194 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 CAPS2Q9BXY5 557 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 ABHD10Q9NUJ1 306 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 SERTAD1Q9UHV2 236 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 DNMT3LQ9UJW3 386 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 HPCAL4Q9UM19 191 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 EPN1Q9Y6I3 576 aaPredicted RBP8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 CHD4Q14839 1912 aa8.05□□□□□ -1.12
CLSTN1-204ENST00000464286 NWD2Q9ULI1 1742 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 GPAA1O43292 621 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 HSF2BPO75031 334 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 CALM1P0DP23 149 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 CALM2P0DP24 149 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 CALM3P0DP25 149 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 LTKP29376 864 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 MAP2K2P36507 400 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 CASP7P55210 303 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 CDK17Q00537 523 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 INSM1Q01101 510 aaPredicted RBP8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 AMPD2Q01433 879 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 PAK1Q13153 545 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 SPA17Q15506 151 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 RTN1Q16799 776 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 OTUD7BQ6GQQ9 843 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 CHST3Q7LGC8 479 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 ATG9AQ7Z3C6 839 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 ANKLE2Q86XL3 938 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 DIS3L2Q8IYB7 885 aaKnown RBP8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 C1orf131Q8NDD1 294 aaKnown RBP8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 P3H4Q92791 437 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 ALS2CR12Q96Q35 445 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 SLC26A6Q9BXS9 759 aa8.04□□□□□ -1.12
CLSTN1-204ENST00000464286 ZSWIM4Q9H7M6 989 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms