RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 RHBDL2Q9NX52 303 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SPATA7Q9P0W8 599 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 HOOK1Q9UJC3 728 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 hCG_2014768A0A024R1R8 64 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 GOLGA6L7A0A1B0GV03 622 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 SMNDC1O75940 238 aaKnown RBP eCLIP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 FESP07332 822 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 SDSP20132 328 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 SLC8A1P32418 973 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 ROR2Q01974 943 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 GUCY1B3Q02153 619 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 CUL3Q13618 768 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 NR6A1Q15406 480 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 ZNF827Q17R98 1081 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 Q4G0T1 1027 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 HSP90AB2PQ58FF8 381 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TTC22Q5TAA0 569 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 RC3H1Q5TC82 1133 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM65Q6PJ69 517 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 B4GALNT4Q76KP1 1039 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 ERMP1Q7Z2K6 904 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC150Q8NCX0 1101 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 SSH1Q8WYL5 1049 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 ARMC5Q96C12 935 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 XAGE2Q96GT9 111 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 INTS4Q96HW7 963 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 CDK15Q96Q40 435 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 OSBPL9Q96SU4 736 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TRAIPQ9BWF2 469 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM7Q9C029 511 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 VCPKMTQ9H867 229 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TFIP11Q9UBB9 837 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 RABL2BQ9UNT1 228 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 MAP4K5Q9Y4K4 846 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 IPO5O00410 1097 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 EIF3HO15372 352 aaKnown RBP eCLIP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 RASSF9O75901 435 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 SYF2O95926 243 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TFRCP02786 760 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 PARP1P09874 1014 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 POLE2P56282 527 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 RHBDL3P58872 404 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 MXRA7P84157 204 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 FAM160A1Q05DH4 1040 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 EXOSC9Q06265 439 aaKnown RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 PDCLQ13371 301 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 IRF5Q13568 498 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 AKAP4Q5JQC9 854 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 FBXO46Q6PJ61 603 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM67Q6ZTA4 783 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 ARHGAP27Q6ZUM4 889 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 C14orf80Q86SX3 495 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 TTC6Q86TZ1 520 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 PLEKHM2Q8IWE5 1019 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 ELOA2Q8IYF1 753 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-205ENST00000463753 CEP57L1Q8IYX8 460 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 MAB21L3Q8N8X9 362 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 RASSF8Q8NHQ8 419 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 CUL5Q93034 780 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 MKL1Q969V6 931 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 IL17RAQ96F46 866 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 PIDD1Q9HB75 910 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 NMRK2Q9NPI5 230 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC87Q9NVE4 849 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 NLRP2Q9NX02 1062 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 IFNKQ9P0W0 207 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 NUB1Q9Y5A7 615 aa4.04□□□□□ -1.76
COL8A1-205ENST00000463753 A0A1B0GVL5 298 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 ERICH2A1L162 156 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 LRRC10BA6NIK2 292 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 CREB3O43889 395 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 OPA1O60313 960 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 MBD4O95243 580 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 LINGO3P0C6S8 592 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 MYL6BP14649 208 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 VARSP26640 1264 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 ATP1A2P50993 1020 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 FOXD4Q12950 439 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM68Q6AZZ1 485 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 Q6ZUG5 572 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC50Q8IVM0 306 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 RNF168Q8IYW5 571 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 UHMK1Q8TAS1 419 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 MIPOL1Q8TD10 442 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 EPS8L1Q8TE68 723 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 WHAMMQ8TF30 809 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 CTNNBL1Q8WYA6 563 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 HINFPQ9BQA5 517 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 PRKD2Q9BZL6 878 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 XPO4Q9C0E2 1151 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 BZW2Q9Y6E2 419 aaKnown RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 ZNF644Q9H582 1327 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 CYP27B1O15528 508 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 TUBB4AP04350 444 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 NAT2P11245 290 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 FERP16591 822 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 ATP4AP20648 1035 aa4.03□□□□□ -1.76
COL8A1-205ENST00000463753 GCLCP48506 637 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-205ENST00000463753 KRT85P78386 507 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms