RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 PRDM5Q9NQX1 630 aaPredicted RBP23.27■■□□□ 1.32
MSH5-210ENST00000463094 PHF24Q9UPV7 400 aa23.27■■□□□ 1.32
MSH5-210ENST00000463094 C6orf222P0C671 652 aaPredicted RBP23.26■■□□□ 1.31
MSH5-210ENST00000463094 CENPQQ7L2Z9 268 aaPredicted RBP23.26■■□□□ 1.31
MSH5-210ENST00000463094 PCSK9Q8NBP7 692 aaKnown RBP23.26■■□□□ 1.31
MSH5-210ENST00000463094 ANKS1AQ92625 1134 aa23.26■■□□□ 1.31
MSH5-210ENST00000463094 LENG1Q96BZ8 264 aaPredicted RBP23.26■■□□□ 1.31
MSH5-210ENST00000463094 GDF15Q99988 308 aa23.26■■□□□ 1.31
MSH5-210ENST00000463094 SYNRGQ9UMZ2 1314 aa23.26■■□□□ 1.31
MSH5-210ENST00000463094 SOWAHBA6NEL2 793 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 MOXD2PA6NHM9 499 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 B4DLN1 442 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 SGSM2O43147 1006 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 MRPL12P52815 198 aaKnown RBP23.25■■□□□ 1.31
MSH5-210ENST00000463094 BAATQ14032 418 aaPredicted RBP23.25■■□□□ 1.31
MSH5-210ENST00000463094 VTI1AQ96AJ9 217 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 IL25Q9H293 177 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 PRO3102Q9H379 93 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 WDR19Q8NEZ3 1342 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 ALPK3Q96L96 1907 aa23.25■■□□□ 1.31
MSH5-210ENST00000463094 CEP290O15078 2479 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 A0A1W2PQ45 241 aaPredicted RBP23.24■■□□□ 1.31
MSH5-210ENST00000463094 A0A1W2PQY0 241 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 CALML3P27482 149 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
MSH5-210ENST00000463094 TNFAIP2Q03169 654 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 USH1GQ495M9 461 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 TRIM60Q495X7 471 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 RNF207Q6ZRF8 634 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 NCOA7Q8NI08 942 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 FGD4Q96M96 766 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 GLT1D1Q96MS3 346 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 UBA5Q9GZZ9 404 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 STARD7Q9NQZ5 370 aa23.24■■□□□ 1.31
MSH5-210ENST00000463094 NFIBO00712 420 aa23.23■■□□□ 1.31
MSH5-210ENST00000463094 ADAMTS4O75173 837 aa23.23■■□□□ 1.31
MSH5-210ENST00000463094 ACLYP53396 1101 aa23.23■■□□□ 1.31
MSH5-210ENST00000463094 PTH1RQ03431 593 aa23.23■■□□□ 1.31
MSH5-210ENST00000463094 AP5M1Q9H0R1 490 aa23.23■■□□□ 1.31
MSH5-210ENST00000463094 LOC102724159A0A0B4J2E5 919 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 IFIT3O14879 490 aaKnown RBP23.22■■□□□ 1.31
MSH5-210ENST00000463094 CYP21A2P08686 494 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 PWP2Q15269 919 aaKnown RBP23.22■■□□□ 1.31
MSH5-210ENST00000463094 KCNA10Q16322 511 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 CDC37Q16543 378 aaPredicted RBP23.22■■□□□ 1.31
MSH5-210ENST00000463094 GNASQ5JWF2 1037 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 C1orf53Q5VUE5 145 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 EEPD1Q7L9B9 569 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 TDHQ8IZJ6 230 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 VTA1Q9NP79 307 aa23.22■■□□□ 1.31
MSH5-210ENST00000463094 SNX17Q15036 470 aa23.21■■□□□ 1.31
MSH5-210ENST00000463094 CASC1Q6TDU7 716 aa23.21■■□□□ 1.31
MSH5-210ENST00000463094 ADGRF4Q8IZF3 695 aa23.21■■□□□ 1.31
MSH5-210ENST00000463094 VAT1LQ9HCJ6 419 aa23.21■■□□□ 1.31
MSH5-210ENST00000463094 ABCB11O95342 1321 aa23.21■■□□□ 1.31
MSH5-210ENST00000463094 DCDC2CA8MYV0 355 aa23.2■■□□□ 1.3
MSH5-210ENST00000463094 ZEB2O60315 1214 aa23.2■■□□□ 1.3
MSH5-210ENST00000463094 PQBP1O60828 265 aaKnown RBP23.2■■□□□ 1.3
MSH5-210ENST00000463094 CST5P28325 142 aaPredicted RBP23.2■■□□□ 1.3
MSH5-210ENST00000463094 ALDH5A1P51649 535 aaPredicted RBP23.2■■□□□ 1.3
MSH5-210ENST00000463094 GJA9P57773 515 aa23.2■■□□□ 1.3
MSH5-210ENST00000463094 PDE4DQ08499 809 aa23.2■■□□□ 1.3
MSH5-210ENST00000463094 IQSEC1Q6DN90 963 aa23.2■■□□□ 1.3
MSH5-210ENST00000463094 MCF2L2Q86YR7 1114 aa23.2■■□□□ 1.3
MSH5-210ENST00000463094 MROH7Q68CQ1 1323 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 E7EWF7 191 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 TLE2Q04725 743 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 WTAPQ15007 396 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 CYB5R4Q7L1T6 521 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 FBXO11Q86XK2 927 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 FBXO16Q8IX29 292 aaPredicted RBP23.19■■□□□ 1.3
MSH5-210ENST00000463094 KLHDC9Q8NEP7 349 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 UPF3AQ9H1J1 476 aaKnown RBP23.19■■□□□ 1.3
MSH5-210ENST00000463094 CPVLQ9H3G5 476 aa23.19■■□□□ 1.3
MSH5-210ENST00000463094 MRPL11Q9Y3B7 192 aaKnown RBP23.19■■□□□ 1.3
MSH5-210ENST00000463094 RBM8AQ9Y5S9 174 aaKnown RBP23.19■■□□□ 1.3
MSH5-210ENST00000463094 ASGR1P07306 291 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 CLTBP09497 229 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 RPS6P62753 249 aaKnown RBP23.18■■□□□ 1.3
MSH5-210ENST00000463094 TRAF1Q13077 416 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 SLC30A10Q6XR72 485 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 DNERQ8NFT8 737 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 CLEC4DQ8WXI8 215 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 MAP4K1Q92918 833 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 MAF1Q9H063 256 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 KATNBL1Q9H079 304 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 PCDH10Q9P2E7 1040 aa23.18■■□□□ 1.3
MSH5-210ENST00000463094 ELP1O95163 1332 aa23.17■■□□□ 1.3
MSH5-210ENST00000463094 KLRF2D3W0D1 207 aa23.17■■□□□ 1.3
MSH5-210ENST00000463094 TMEM67Q5HYA8 995 aa23.17■■□□□ 1.3
MSH5-210ENST00000463094 CATIPQ7Z7H3 387 aa23.17■■□□□ 1.3
MSH5-210ENST00000463094 RGS22Q8NE09 1264 aa23.17■■□□□ 1.3
MSH5-210ENST00000463094 PURBQ96QR8 312 aaKnown RBP23.17■■□□□ 1.3
MSH5-210ENST00000463094 DYNC1LI2O43237 492 aaPredicted RBP23.16■■□□□ 1.3
MSH5-210ENST00000463094 SEC23AQ15436 765 aa23.16■■□□□ 1.3
MSH5-210ENST00000463094 FSCN1Q16658 493 aaKnown RBP23.16■■□□□ 1.3
MSH5-210ENST00000463094 QRICH1Q2TAL8 776 aa23.16■■□□□ 1.3
MSH5-210ENST00000463094 AMNQ9BXJ7 453 aa23.16■■□□□ 1.3
MSH5-210ENST00000463094 ANO2Q9NQ90 1003 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms