RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 USP34Q70CQ2 3546 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 FAM187AA6NFU0 413 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 FAM196BA6NMK8 535 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 SMAPO00193 183 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 SEPT4O43236 478 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 ATP9BO43861 1147 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 SURF6O75683 361 aaKnown RBP7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 IGHA2P01877 340 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 SLC5A1P13866 664 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 CSF2RAP15509 400 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 CAP2P40123 477 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 IL15P40933 162 aaPredicted RBP7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 BACE1P56817 501 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 INSM1Q01101 510 aaPredicted RBP7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 GUCA2AQ02747 115 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 RRP1BQ14684 758 aaKnown RBP7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 LRRC24Q50LG9 513 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 TBC1D9Q6ZT07 1266 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 ANKRD33Q7Z3H0 272 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 GJD3Q8N144 294 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 EXOC6Q8TAG9 804 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 TOX2Q96NM4 488 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 AS3MTQ9HBK9 375 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 MYH2Q9UKX2 1941 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 ZNF318Q5VUA4 2279 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 ATAD5Q96QE3 1844 aa7.2□□□□□ -1.26
SMARCC1-204ENST00000462198 C19orf81C9J6K1 198 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 ST8SIA5O15466 376 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 PDE8BO95263 885 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 FGBP02675 491 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 LDHBP07195 334 aaKnown RBP7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 MYOGP15173 224 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 PRDX5P30044 214 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 RABGGTBP53611 331 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 CCNA1P78396 465 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 PICALMQ13492 652 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 KRT40Q6A162 431 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 ATG9AQ7Z3C6 839 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 DPP9Q86TI2 863 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 TMEM199Q8N511 208 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 GTF3C2Q8WUA4 911 aaPredicted RBP7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 ANKS1AQ92625 1134 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 DDX4Q9NQI0 724 aaKnown RBP7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 CEP126Q9P2H0 1117 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 ZMIZ1Q9ULJ6 1067 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 RABGAP1Q9Y3P9 1069 aa7.19□□□□□ -1.26
SMARCC1-204ENST00000462198 CACNA1BQ00975 2339 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 A0A1W2PQ45 241 aaPredicted RBP7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 A0A1W2PQY0 241 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 RNF223E7ERA6 249 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 CNMDO75829 334 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 GRB14Q14449 540 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 PUM3Q15397 648 aaKnown RBP7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 HSP90AB4PQ58FF6 505 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 FAM47AQ5JRC9 791 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 OLFML2BQ68BL8 750 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 PSRC1Q6PGN9 363 aaPredicted RBP7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 RNF180Q86T96 592 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 ERC1Q8IUD2 1116 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 SIRT2Q8IXJ6 389 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 FAM178BQ8IXR5 827 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 BACH2Q9BYV9 841 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 TBX21Q9UL17 535 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 NAP1L2Q9ULW6 460 aaPredicted RBP7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 EXOC6BQ9Y2D4 811 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 AKAP2Q9Y2D5 859 aa7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 ZNFX1Q9P2E3 1918 aaKnown RBP7.18□□□□□ -1.26
SMARCC1-204ENST00000462198 USP17L10C9JJH3 530 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 GDF9O60383 454 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 PGK1P00558 417 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 IFIT1P09914 478 aaKnown RBP7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 COPS2P61201 443 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 TFCP2Q12800 502 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 NFX1Q12986 1120 aaKnown RBP7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 SEMA3FQ13275 785 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 ATP2B3Q16720 1220 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 PHLDB3Q6NSJ2 640 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 OTOP2Q7RTS6 562 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 VGLL2Q8N8G2 317 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 MFSD14AQ96MC6 490 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 MTIF3Q9H2K0 278 aaKnown RBP7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 CERS4Q9HA82 394 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 IL23AQ9NPF7 189 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 XPNPEP3Q9NQH7 507 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 PCDHA11Q9Y5I1 949 aa7.17□□□□□ -1.26
SMARCC1-204ENST00000462198 MYO5AQ9Y4I1 1855 aaKnown RBP7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 A0A1B0GUL7 405 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 STRNO43815 780 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 RAB11FIP3O75154 756 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 RARBP10826 455 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 JAG1P78504 1218 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 HDAC1Q13547 482 aaPredicted RBP7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 TMEM164Q5U3C3 297 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 DNAJC14Q6Y2X3 702 aaPredicted RBP7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 HFE2Q6ZVN8 426 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 CRIPAKQ8N1N5 446 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 LPIN2Q92539 896 aa7.16□□□□□ -1.26
SMARCC1-204ENST00000462198 NEUROD6Q96NK8 337 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms