RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RELTQ969Z4 430 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 DHRS4Q9BTZ2 278 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 ARHGEF4Q9NR80 690 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 FAM86C1Q9NVL1 165 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.34□□□□□ -1.71
HDAC6-212ENST00000461608 APEX2Q9UBZ4 518 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 CGGBP1Q9UFW8 167 aaPredicted RBP4.34□□□□□ -1.71
HDAC6-212ENST00000461608 ZNF451Q9Y4E5 1061 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 hCG_2014768A0A024R1R8 64 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 EFCAB14O75071 495 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 GSNP06396 782 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 CEACAM5P06731 702 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 ITGAVP06756 1048 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 FAM153BP0C7A2 387 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 NAT1P18440 290 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 ITIH2P19823 946 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 CLCN7P51798 805 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 AMPD2Q01433 879 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 POU4F1Q01851 419 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 NMIQ13287 307 aaPredicted RBP4.33□□□□□ -1.72
HDAC6-212ENST00000461608 PTPROQ16827 1216 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 CWF19L1Q69YN2 538 aaKnown RBP4.33□□□□□ -1.72
HDAC6-212ENST00000461608 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 THAP5Q7Z6K1 395 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 FIBCD1Q8N539 461 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 KCTD13Q8WZ19 329 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 NINJ1Q92982 152 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 KISS1RQ969F8 398 aaPredicted RBP4.33□□□□□ -1.72
HDAC6-212ENST00000461608 MFSD3Q96ES6 412 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 MRGPRX3Q96LB0 322 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 FGD4Q96M96 766 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 GPR62Q9BZJ7 368 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 NCOA5Q9HCD5 579 aaKnown RBP4.33□□□□□ -1.72
HDAC6-212ENST00000461608 CHST7Q9NS84 486 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 INTS7Q9NVH2 962 aaKnown RBP4.33□□□□□ -1.72
HDAC6-212ENST00000461608 JAG2Q9Y219 1238 aa4.33□□□□□ -1.72
HDAC6-212ENST00000461608 MRPS23Q9Y3D9 190 aaKnown RBP4.33□□□□□ -1.72
HDAC6-212ENST00000461608 PPM1GO15355 546 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-212ENST00000461608 SCG5P05408 212 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 HOXC12P31275 282 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 ZNF445P59923 1031 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 GABREP78334 506 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 CLEC16AQ2KHT3 1053 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 TRIM61Q5EBN2 209 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 ZNF662Q6ZS27 426 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 MAMDC2Q7Z304 686 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-212ENST00000461608 FILIP1Q7Z7B0 1213 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 AMIGO3Q86WK7 504 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 NIM1KQ8IY84 436 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 ZNF655Q8N720 491 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-212ENST00000461608 DAGLBQ8NCG7 672 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 RIN3Q8TB24 985 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 ASB11Q8WXH4 323 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 HDAC8Q9BY41 377 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 PRDM14Q9GZV8 571 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 NKX2-4Q9H2Z4 354 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 NOL6Q9H6R4 1146 aaKnown RBP4.32□□□□□ -1.72
HDAC6-212ENST00000461608 KANSL2Q9H9L4 492 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 GPATCH2Q9NW75 528 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 GFOD1Q9NXC2 390 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 SFMBT1Q9UHJ3 866 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 NOP58Q9Y2X3 529 aaKnown RBP4.32□□□□□ -1.72
HDAC6-212ENST00000461608 CAPN6Q9Y6Q1 641 aa4.32□□□□□ -1.72
HDAC6-212ENST00000461608 CNTNAP4Q9C0A0 1308 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 TRBV23OR9-2A0A075B6M9 112 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 FAM155AB1AL88 458 aaPredicted RBP4.31□□□□□ -1.72
HDAC6-212ENST00000461608 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.31□□□□□ -1.72
HDAC6-212ENST00000461608 NPIPB6E9PJ23 425 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 KCNQ2O43526 872 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 PRAMEF1O95521 474 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 CAPNS1P04632 268 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 GLI1P08151 1106 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 VIL1P09327 827 aaKnown RBP4.31□□□□□ -1.72
HDAC6-212ENST00000461608 C1QTNF9P0C862 333 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 PABPC1P11940 636 aaKnown RBP4.31□□□□□ -1.72
HDAC6-212ENST00000461608 BMP8BP34820 402 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 NOP2P46087 812 aaKnown RBP4.31□□□□□ -1.72
HDAC6-212ENST00000461608 GYS2P54840 703 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 GFRA1P56159 465 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 ANAPC15P60006 121 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 IGBP1P78318 339 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 IKZF1Q13422 519 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 DALRD3Q5D0E6 543 aaKnown RBP4.31□□□□□ -1.72
HDAC6-212ENST00000461608 GTF2IRD2BQ6EKJ0 949 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 NSMFQ6X4W1 530 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 GTF2IRD2Q86UP8 949 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 C1QL4Q86Z23 238 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 CILP2Q8IUL8 1156 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 SPACA3Q8IXA5 215 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 ADCY4Q8NFM4 1077 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 EXOC2Q96KP1 924 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 Q96M66 194 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 ZFYVE21Q9BQ24 234 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 IER2Q9BTL4 223 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 CYP26B1Q9NR63 512 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 MAGEC2Q9UBF1 373 aaPredicted RBP4.31□□□□□ -1.72
HDAC6-212ENST00000461608 COL4A3BPQ9Y5P4 624 aa4.31□□□□□ -1.72
HDAC6-212ENST00000461608 NUAK1O60285 661 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 KCNH1O95259 989 aa4.3□□□□□ -1.72
HDAC6-212ENST00000461608 CBX7O95931 251 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms