RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PSMA5P28066 241 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 GNAQP50148 359 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 COL9A3Q14050 684 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 TCEANC2Q96MN5 208 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 ABCB11O95342 1321 aa12.31□□□□□ -0.44
TRAPPC12-213ENST00000461577 PTPDC1A2A3K4 754 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 NFIBO00712 420 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 CYBAP13498 195 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 CNTN2Q02246 1040 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 PRAMEF19Q5SWL8 479 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 SGMS1Q86VZ5 419 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 RAB11FIP4Q86YS3 637 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 SHISA4Q96DD7 197 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 LZTS2Q9BRK4 669 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 DDX20Q9UHI6 824 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 NRBP1Q9UHY1 535 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 CNPY2Q9Y2B0 182 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 SYNGAP1Q96PV0 1343 aa12.3□□□□□ -0.44
TRAPPC12-213ENST00000461577 ZBTB5O15062 677 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 MSCO60682 206 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 FARP2O94887 1054 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 IGHA2P01877 340 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 CPA1P15085 419 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 RXRAP19793 462 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 CASTP20810 708 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 TRAF1Q13077 416 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 MAMDC4Q6UXC1 1216 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 MICU3Q86XE3 530 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 CLEC4DQ8WXI8 215 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 MTMR8Q96EF0 704 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 CRISPLD2Q9H0B8 497 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 BAZ2BQ9UIF8 2168 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 MCM3APO60318 1980 aa12.29□□□□□ -0.44
TRAPPC12-213ENST00000461577 FRMPD3Q5JV73 1810 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 KLF18A0A0U1RQI7 1052 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 ASB14A6NK59 587 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 SEPT4O43236 478 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 ZBTB43O43298 467 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 CALML3P27482 149 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 Q6ZUG5 572 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 MCF2L2Q86YR7 1114 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 FANCBQ8NB91 859 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 PIGSQ96S52 555 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 ADD3Q9UEY8 706 aaKnown RBP12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 ZHX1Q9UKY1 873 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 OGDHLQ9ULD0 1010 aa12.28□□□□□ -0.44
TRAPPC12-213ENST00000461577 LCTP09848 1927 aa12.27□□□□□ -0.44
TRAPPC12-213ENST00000461577 PNMA6FA0A0J9YX94 578 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 CYTH3O43739 400 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 RPS6P62753 249 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 RTN1Q16799 776 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 ANO1Q5XXA6 986 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 LHX8Q68G74 356 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 APOA5Q6Q788 366 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 SLC30A10Q6XR72 485 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 ARMCX2Q7L311 632 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 RGS22Q8NE09 1264 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 RRP36Q96EU6 259 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 FGD4Q96M96 766 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 MPHOSPH6Q99547 160 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 SPZ1Q9BXG8 430 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 MAF1Q9H063 256 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 RBM28Q9NW13 759 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 SEC63Q9UGP8 760 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 CYP46A1Q9Y6A2 500 aa12.27□□□□□ -0.45
TRAPPC12-213ENST00000461577 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 B4DLN1 442 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 SNAI1O95863 264 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 ZNF865P0CJ78 1059 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 RARBP10826 455 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 AKR1A1P14550 325 aa12.26□□□□□ -0.45
TRAPPC12-213ENST00000461577 ALDH5A1P51649 535 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms