RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 LRFN3Q9BTN0 628 aa11.23□□□□□ -0.61
NECTIN3-202ENST00000461477 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
NECTIN3-202ENST00000461477 ARMT1Q9H993 441 aa11.23□□□□□ -0.61
NECTIN3-202ENST00000461477 IL23AQ9NPF7 189 aa11.23□□□□□ -0.61
NECTIN3-202ENST00000461477 ZHX1Q9UKY1 873 aaPredicted RBP11.23□□□□□ -0.61
NECTIN3-202ENST00000461477 ZNF532Q9HCE3 1301 aa11.23□□□□□ -0.61
NECTIN3-202ENST00000461477 DMDP11532 3685 aa11.23□□□□□ -0.61
NECTIN3-202ENST00000461477 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 ELP1O95163 1332 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 CDK8P49336 464 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 COL4A4P53420 1690 aaPredicted RBP11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 BEX3Q00994 111 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 KCTD2Q14681 263 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 SLC9C2Q5TAH2 1124 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 OTOP2Q7RTS6 562 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 SPRED2Q7Z698 418 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 NUP133Q8WUM0 1156 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 FRAT1Q92837 279 aaPredicted RBP11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 WNT8AQ9H1J5 351 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 FAM184BQ9ULE4 1060 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 CNPY2Q9Y2B0 182 aa11.22□□□□□ -0.61
NECTIN3-202ENST00000461477 MYH7P12883 1935 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 MYO15AQ9UKN7 3530 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 CFAP54Q96N23 3096 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 ZBED9Q6R2W3 1325 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 SYNGAP1Q96PV0 1343 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 RLBP1P12271 317 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 CCL23P55773 120 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 GJA9P57773 515 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 ACVR2BQ13705 512 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 PSRC1Q6PGN9 363 aaPredicted RBP11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 CERS3Q8IU89 383 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 TMEM199Q8N511 208 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 SLC43A3Q8NBI5 491 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 CRNKL1Q9BZJ0 848 aaKnown RBP11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 EXOC6BQ9Y2D4 811 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
NECTIN3-202ENST00000461477 A0A0U1RQG5 324 aaPredicted RBP11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 FAM86C2PA6NEL3 165 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 HRO43593 1189 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 RAB30Q15771 203 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 E2F4Q16254 413 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 C12orf60Q5U649 245 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 AACSQ86V21 672 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 GLT1D1Q96MS3 346 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 TRPV6Q9H1D0 765 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 CERS4Q9HA82 394 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 SLC28A3Q9HAS3 691 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 IL1RAPL2Q9NP60 686 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 CD320Q9NPF0 282 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 MSRAQ9UJ68 235 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 VPS9D1Q9Y2B5 631 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 MTCH2Q9Y6C9 303 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 TET1Q8NFU7 2136 aa11.2□□□□□ -0.62
NECTIN3-202ENST00000461477 MROH7Q68CQ1 1323 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 APBB1O00213 710 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 GOLIM4O00461 696 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 TLL1O43897 1013 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 MBD4O95243 580 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 FGBP02675 491 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 CNTN2Q02246 1040 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 TTLL4Q14679 1199 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 GNASQ5JWF2 1037 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 CXCL17Q6UXB2 119 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 C16orf86Q6ZW13 317 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 VTI1AQ96AJ9 217 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 SCLYQ96I15 445 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 NOC4LQ9BVI4 516 aaKnown RBP11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 SLC4A5Q9BY07 1137 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 SWAP70Q9UH65 585 aa11.19□□□□□ -0.62
NECTIN3-202ENST00000461477 WDR87Q6ZQQ6 2873 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 USP17L21D6R901 530 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 ERC2O15083 957 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 RAD21O60216 631 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 B4GALT4O60513 344 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 PSMC6P62333 389 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 NKX3-2P78367 333 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 CEP85Q6P2H3 762 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 ARMCX2Q7L311 632 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 CCDC144CPQ8IYA2 1237 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 EPAS1Q99814 870 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 SLF1Q9BQI6 1058 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 HIPK3Q9H422 1215 aa11.18□□□□□ -0.62
NECTIN3-202ENST00000461477 RAVER2Q9HCJ3 691 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms