RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 FSCN1Q16658 493 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 STAG1Q8WVM7 1258 aa17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
DNMT3A-207ENST00000461228 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
DNMT3A-207ENST00000461228 TNFRSF10AO00220 468 aa17.28■□□□□ 0.36
DNMT3A-207ENST00000461228 SLC1A4P43007 532 aa17.28■□□□□ 0.36
DNMT3A-207ENST00000461228 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
DNMT3A-207ENST00000461228 NAPBQ9H115 298 aa17.28■□□□□ 0.36
DNMT3A-207ENST00000461228 HIPK3Q9H422 1215 aa17.28■□□□□ 0.36
DNMT3A-207ENST00000461228 TMEM232C9JQI7 657 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 M0R2C6 588 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 PPARAQ07869 468 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 IQSEC1Q6DN90 963 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 ZNF365Q70YC5 407 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 NOC4LQ9BVI4 516 aaKnown RBP17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 MAF1Q9H063 256 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 CYP39A1Q9NYL5 469 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 MSRAQ9UJ68 235 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
DNMT3A-207ENST00000461228 SOWAHBA6NEL2 793 aa17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 PRDM1O75626 825 aa17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 ICAM1P05362 532 aa17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 CNTN2Q02246 1040 aa17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 ITGA7Q13683 1181 aa17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 COL4A4P53420 1690 aaPredicted RBP17.26■□□□□ 0.35
DNMT3A-207ENST00000461228 ORC4O43929 436 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 FGRP09769 529 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 NT5C2P49902 561 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 BTNL9Q6UXG8 535 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 DCAF4Q8WV16 495 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 AP5M1Q9H0R1 490 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 HOMER2Q9NSB8 354 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 ADD3Q9UEY8 706 aaKnown RBP17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 PCDHA11Q9Y5I1 949 aa17.25■□□□□ 0.35
DNMT3A-207ENST00000461228 GRIN2DO15399 1336 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 KIAA1217Q5T5P2 1943 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 APPP05067 770 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 SMPD1P17405 629 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 POU3F3P20264 500 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 PBX2P40425 430 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 TFAP4Q01664 338 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 DUSP28Q4G0W2 176 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 TAPT1Q6NXT6 567 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 RPUSD2Q8IZ73 545 aaKnown RBP17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 MIER1Q8N108 512 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 TRERF1Q96PN7 1200 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 ASB2Q96Q27 587 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 SCN5AQ14524 2016 aa17.24■□□□□ 0.35
DNMT3A-207ENST00000461228 WDR19Q8NEZ3 1342 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 RBM47A0AV96 593 aaKnown RBP17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 FOXP2O15409 715 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 B4GALT4O60513 344 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 FGBP02675 491 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 CYP2C18P33260 490 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 RFC2P35250 354 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 CPT1AP50416 773 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 VTI1AQ96AJ9 217 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 PRDM12Q9H4Q4 367 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 SLC28A3Q9HAS3 691 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 CXXC1Q9P0U4 656 aaPredicted RBP17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 PRR12Q9ULL5 1215 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 PTPRSQ13332 1948 aa17.23■□□□□ 0.35
DNMT3A-207ENST00000461228 RAD50Q92878 1312 aa17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 TSPY2A6NKD2 308 aa17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 NKRFO15226 690 aaKnown RBP eCLIP17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 PCP11498 1178 aaKnown RBP17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 MRPS5P82675 430 aaKnown RBP17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 BEX3Q00994 111 aa17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 IKQ13123 557 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 FBXO16Q8IX29 292 aaPredicted RBP17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 CCPG1Q9ULG6 757 aa17.22■□□□□ 0.35
DNMT3A-207ENST00000461228 ALAS1P13196 640 aa17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 EDNRBP24530 442 aa17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 PTPN11Q06124 597 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 ADGRE1Q14246 886 aa17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 TSPYL2Q9H2G4 693 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 IL17RBQ9NRM6 502 aa17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 PRRC2BQ5JSZ5 2229 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-207ENST00000461228 MYH6P13533 1939 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms