RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 A0A0U1RQG5 324 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-206ENST00000461217 EPHB4P54760 987 aa17.82■□□□□ 0.44
COL16A1-206ENST00000461217 ALX1Q15699 326 aa17.82■□□□□ 0.44
COL16A1-206ENST00000461217 MUM1L1Q5H9M0 696 aa17.82■□□□□ 0.44
COL16A1-206ENST00000461217 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
COL16A1-206ENST00000461217 LNPKQ9C0E8 428 aa17.82■□□□□ 0.44
COL16A1-206ENST00000461217 KATNBL1Q9H079 304 aa17.82■□□□□ 0.44
COL16A1-206ENST00000461217 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-206ENST00000461217 TLR3O15455 904 aaKnown RBP17.81■□□□□ 0.44
COL16A1-206ENST00000461217 FGAP02671 866 aa17.81■□□□□ 0.44
COL16A1-206ENST00000461217 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
COL16A1-206ENST00000461217 SLC16A2P36021 539 aa17.81■□□□□ 0.44
COL16A1-206ENST00000461217 HAND2P61296 217 aa17.81■□□□□ 0.44
COL16A1-206ENST00000461217 BEX3Q00994 111 aa17.81■□□□□ 0.44
COL16A1-206ENST00000461217 NMIQ13287 307 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-206ENST00000461217 EEPD1Q7L9B9 569 aa17.81■□□□□ 0.44
COL16A1-206ENST00000461217 CYP39A1Q9NYL5 469 aa17.81■□□□□ 0.44
COL16A1-206ENST00000461217 LRRC37A2A6NM11 1700 aa17.81■□□□□ 0.44
COL16A1-206ENST00000461217 FRMPD2Q68DX3 1309 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-206ENST00000461217 CCDC171Q6TFL3 1326 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 ARVCFO00192 962 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 TIMP1P01033 207 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 ICAM1P05362 532 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 HSPD1P10809 573 aaKnown RBP17.8■□□□□ 0.44
COL16A1-206ENST00000461217 TLK2Q86UE8 772 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 ZNF589Q86UQ0 364 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-206ENST00000461217 CDX2Q99626 313 aaPredicted RBP17.8■□□□□ 0.44
COL16A1-206ENST00000461217 AP5M1Q9H0R1 490 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 GPCPD1Q9NPB8 672 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 TBX21Q9UL17 535 aa17.8■□□□□ 0.44
COL16A1-206ENST00000461217 DDX49Q9Y6V7 483 aaKnown RBP17.8■□□□□ 0.44
COL16A1-206ENST00000461217 FGRP09769 529 aa17.79■□□□□ 0.44
COL16A1-206ENST00000461217 SYDE2Q5VT97 1194 aa17.79■□□□□ 0.44
COL16A1-206ENST00000461217 TTBK2Q6IQ55 1244 aa17.79■□□□□ 0.44
COL16A1-206ENST00000461217 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-206ENST00000461217 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
COL16A1-206ENST00000461217 TMEM47Q9BQJ4 181 aa17.79■□□□□ 0.44
COL16A1-206ENST00000461217 PPP1R12CQ9BZL4 782 aa17.79■□□□□ 0.44
COL16A1-206ENST00000461217 RANBP17Q9H2T7 1088 aaKnown RBP17.79■□□□□ 0.44
COL16A1-206ENST00000461217 SEMA6BQ9H3T3 888 aa17.79■□□□□ 0.44
COL16A1-206ENST00000461217 ASTN1O14525 1302 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 ZMYM6O95789 1325 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 PTPDC1A2A3K4 754 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 DYNC1LI2O43237 492 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-206ENST00000461217 NOVP48745 357 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 CDK7P50613 346 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 MFAP1P55081 439 aaKnown RBP17.78■□□□□ 0.44
COL16A1-206ENST00000461217 FSCN1Q16658 493 aaKnown RBP17.78■□□□□ 0.44
COL16A1-206ENST00000461217 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 CXCL17Q6UXB2 119 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 MFSD6Q6ZSS7 791 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 TICAM2Q86XR7 235 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL16A1-206ENST00000461217 FAM126BQ8IXS8 530 aa17.78■□□□□ 0.44
COL16A1-206ENST00000461217 ADD3Q9UEY8 706 aaKnown RBP17.78■□□□□ 0.44
COL16A1-206ENST00000461217 CTAGE5O15320 804 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 ZEB2O60315 1214 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 SMPD1P17405 629 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 PPIGQ13427 754 aaKnown RBP eCLIP17.77■□□□□ 0.443e-12■■■■■ 44.3
COL16A1-206ENST00000461217 AKNAD1Q5T1N1 836 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 KIAA1211Q6ZU35 1233 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 TMEM199Q8N511 208 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 MYLIPQ8WY64 445 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 PURBQ96QR8 312 aaKnown RBP17.77■□□□□ 0.44
COL16A1-206ENST00000461217 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.77■□□□□ 0.443e-6■■■■■ 35.2
COL16A1-206ENST00000461217 TTYH1Q9H313 450 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-206ENST00000461217 PDGFCQ9NRA1 345 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 TCP11L1Q9NUJ3 509 aa17.77■□□□□ 0.44
COL16A1-206ENST00000461217 GNEQ9Y223 722 aaKnown RBP17.77■□□□□ 0.44
COL16A1-206ENST00000461217 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-206ENST00000461217 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-206ENST00000461217 NFIBO00712 420 aa17.76■□□□□ 0.43
COL16A1-206ENST00000461217 CABYRO75952 493 aa17.76■□□□□ 0.43
COL16A1-206ENST00000461217 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
COL16A1-206ENST00000461217 PTGS1P23219 599 aa17.76■□□□□ 0.43
COL16A1-206ENST00000461217 NKX3-2P78367 333 aa17.76■□□□□ 0.43
COL16A1-206ENST00000461217 BAATQ14032 418 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-206ENST00000461217 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
COL16A1-206ENST00000461217 MAFAQ8NHW3 353 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-206ENST00000461217 RNF41Q9H4P4 317 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-206ENST00000461217 VTA1Q9NP79 307 aa17.76■□□□□ 0.43
COL16A1-206ENST00000461217 TMEM265A0A087WTH1 108 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 PDHBP11177 359 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 FOSL2P15408 326 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 CSF2RAP15509 400 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 CALML3P27482 149 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 ALDH5A1P51649 535 aaPredicted RBP17.75■□□□□ 0.43
COL16A1-206ENST00000461217 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 TAPT1Q6NXT6 567 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 ESR2Q92731 530 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
COL16A1-206ENST00000461217 ZNF213O14771 459 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 ACRP10323 421 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 SDSP20132 328 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 DNAJB2P25686 324 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 CYP2C18P33260 490 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
COL16A1-206ENST00000461217 PSRC1Q6PGN9 363 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms